4EZ6
Bacillus DNA Polymerase I Large Fragment Complex 1
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
| A | 0006260 | biological_process | DNA replication |
| A | 0006261 | biological_process | DNA-templated DNA replication |
| A | 0008408 | molecular_function | 3'-5' exonuclease activity |
| D | 0003676 | molecular_function | nucleic acid binding |
| D | 0003677 | molecular_function | DNA binding |
| D | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| D | 0006139 | biological_process | nucleobase-containing compound metabolic process |
| D | 0006260 | biological_process | DNA replication |
| D | 0006261 | biological_process | DNA-templated DNA replication |
| D | 0008408 | molecular_function | 3'-5' exonuclease activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE DG3 A 901 |
| Chain | Residue |
| A | ARG629 |
| A | HOH1131 |
| A | HOH1257 |
| A | HOH1361 |
| A | HOH1425 |
| B | DDG29 |
| C | DG3 |
| C | DC4 |
| A | SER655 |
| A | GLN656 |
| A | GLU658 |
| A | ARG702 |
| A | LYS706 |
| A | TYR710 |
| A | HOH1030 |
| A | HOH1112 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MPD A 902 |
| Chain | Residue |
| A | PRO597 |
| A | HOH1041 |
| D | LEU352 |
| D | LYS383 |
| D | HOH1070 |
| site_id | AC3 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE DG3 D 901 |
| Chain | Residue |
| D | ARG629 |
| D | SER655 |
| D | GLN656 |
| D | GLU658 |
| D | HIS682 |
| D | ARG702 |
| D | LYS706 |
| D | TYR710 |
| D | HOH1001 |
| D | HOH1038 |
| D | HOH1096 |
| D | HOH1199 |
| D | HOH1218 |
| D | HOH1243 |
| D | HOH1483 |
| D | HOH1676 |
| E | DDG29 |
| F | DG3 |
| F | DC4 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 D 902 |
| Chain | Residue |
| D | MET299 |
| D | ALA300 |
| D | ARG343 |
| D | ARG677 |
Functional Information from PROSITE/UniProt
| site_id | PS00447 |
| Number of Residues | 20 |
| Details | DNA_POLYMERASE_A DNA polymerase family A signature. RrqAKavnYGivYgiSdygL |
| Chain | Residue | Details |
| A | ARG702-LEU721 |
