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4EXM

The crystal structure of an engineered phage lysin containing the binding domain of pesticin and the killing domain of T4-lysozyme

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0009253biological_processpeptidoglycan catabolic process
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0030430cellular_componenthost cell cytoplasm
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0044659biological_processviral release from host cell by cytolysis
B0003796molecular_functionlysozyme activity
B0009253biological_processpeptidoglycan catabolic process
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0016998biological_processcell wall macromolecule catabolic process
B0030430cellular_componenthost cell cytoplasm
B0031640biological_processkilling of cells of another organism
B0042742biological_processdefense response to bacterium
B0044659biological_processviral release from host cell by cytolysis
C0003796molecular_functionlysozyme activity
C0009253biological_processpeptidoglycan catabolic process
C0016798molecular_functionhydrolase activity, acting on glycosyl bonds
C0016998biological_processcell wall macromolecule catabolic process
C0030430cellular_componenthost cell cytoplasm
C0031640biological_processkilling of cells of another organism
C0042742biological_processdefense response to bacterium
C0044659biological_processviral release from host cell by cytolysis
D0003796molecular_functionlysozyme activity
D0009253biological_processpeptidoglycan catabolic process
D0016798molecular_functionhydrolase activity, acting on glycosyl bonds
D0016998biological_processcell wall macromolecule catabolic process
D0030430cellular_componenthost cell cytoplasm
D0031640biological_processkilling of cells of another organism
D0042742biological_processdefense response to bacterium
D0044659biological_processviral release from host cell by cytolysis
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04110, ECO:0000269|PubMed:3382407, ECO:0000269|PubMed:7831309, ECO:0000269|PubMed:8266098
ChainResidueDetails
AASP180
BASP180
CASP180
DASP180

site_idSWS_FT_FI2
Number of Residues4
DetailsACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04110, ECO:0000269|PubMed:1892846, ECO:0000269|PubMed:3382407, ECO:0000269|PubMed:7831309, ECO:0000269|PubMed:8266098
ChainResidueDetails
ALYS189
BLYS189
CLYS189
DLYS189

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:8266098
ChainResidueDetails
AHIS201
AVAL273
BHIS201
BVAL273
CHIS201
CVAL273
DHIS201
DVAL273

site_idSWS_FT_FI4
Number of Residues8
DetailsBINDING: BINDING => ECO:0000303|PubMed:7831309
ChainResidueDetails
AASN286
AVAL301
BASN286
BVAL301
CASN286
CVAL301
DASN286
DVAL301

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 921
ChainResidueDetails
AASP180proton shuttle (general acid/base)
ALYS189covalent catalysis

site_idMCSA2
Number of Residues2
DetailsM-CSA 921
ChainResidueDetails
BASP180proton shuttle (general acid/base)
BLYS189covalent catalysis

site_idMCSA3
Number of Residues2
DetailsM-CSA 921
ChainResidueDetails
CASP180proton shuttle (general acid/base)
CLYS189covalent catalysis

site_idMCSA4
Number of Residues2
DetailsM-CSA 921
ChainResidueDetails
DASP180proton shuttle (general acid/base)
DLYS189covalent catalysis

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PDB entries from 2024-05-01

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