4EUM
Crystal structure of a sugar kinase (Target EFI-502132) from Oceanicola granulosus with bound AMP, crystal form II
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005829 | cellular_component | cytosol |
| A | 0006974 | biological_process | DNA damage response |
| A | 0008673 | molecular_function | 2-dehydro-3-deoxygluconokinase activity |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016772 | molecular_function | transferase activity, transferring phosphorus-containing groups |
| A | 0019698 | biological_process | D-galacturonate catabolic process |
| A | 0042840 | biological_process | D-glucuronate catabolic process |
| A | 0046835 | biological_process | carbohydrate phosphorylation |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005829 | cellular_component | cytosol |
| B | 0006974 | biological_process | DNA damage response |
| B | 0008673 | molecular_function | 2-dehydro-3-deoxygluconokinase activity |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016772 | molecular_function | transferase activity, transferring phosphorus-containing groups |
| B | 0019698 | biological_process | D-galacturonate catabolic process |
| B | 0042840 | biological_process | D-glucuronate catabolic process |
| B | 0046835 | biological_process | carbohydrate phosphorylation |
| B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE AMP A 401 |
| Chain | Residue |
| A | SER192 |
| A | HOH506 |
| A | HOH627 |
| A | HOH660 |
| A | HOH681 |
| A | HOH710 |
| A | LYS223 |
| A | ASN224 |
| A | GLY225 |
| A | VAL242 |
| A | ALA254 |
| A | PHE258 |
| A | ALA280 |
| A | ALA283 |
| site_id | AC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CL A 402 |
| Chain | Residue |
| B | GLN233 |
| B | LEU272 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CL A 403 |
| Chain | Residue |
| A | ARG165 |
| A | PRO166 |
| A | ARG167 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL A 404 |
| Chain | Residue |
| A | GLN233 |
| A | LEU272 |
| A | HOH590 |
| B | ASN-6 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG A 405 |
| Chain | Residue |
| A | LEU40 |
| A | HOH581 |
| A | HOH588 |
| A | HOH666 |
| A | HOH669 |
| A | HOH727 |
| site_id | AC6 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE AMP B 401 |
| Chain | Residue |
| B | SER192 |
| B | GLY225 |
| B | VAL248 |
| B | ALA254 |
| B | PHE258 |
| B | ALA280 |
| B | ALA283 |
| B | HOH511 |
| B | HOH694 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CL B 402 |
| Chain | Residue |
| B | ARG165 |
| B | PRO166 |
| B | ARG167 |
Functional Information from PROSITE/UniProt
| site_id | PS00584 |
| Number of Residues | 14 |
| Details | PFKB_KINASES_2 pfkB family of carbohydrate kinases signature 2. DTtAAGDsfnAGLL |
| Chain | Residue | Details |
| A | ASP250-LEU263 |
