4EP5
Thermus thermophilus RuvC structure
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0004518 | molecular_function | nuclease activity |
| A | 0004519 | molecular_function | endonuclease activity |
| A | 0004520 | molecular_function | DNA endonuclease activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006281 | biological_process | DNA repair |
| A | 0006310 | biological_process | DNA recombination |
| A | 0006974 | biological_process | DNA damage response |
| A | 0008821 | molecular_function | crossover junction DNA endonuclease activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0048476 | cellular_component | Holliday junction resolvase complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE SO4 A 201 |
| Chain | Residue |
| A | VAL35 |
| A | HOH308 |
| A | HOH312 |
| A | VAL35 |
| A | VAL36 |
| A | LYS37 |
| A | LYS37 |
| A | ARG50 |
| A | ARG50 |
| A | SO4202 |
| A | SO4202 |
| site_id | AC2 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE SO4 A 202 |
| Chain | Residue |
| A | GLU34 |
| A | GLU34 |
| A | VAL35 |
| A | VAL35 |
| A | LYS37 |
| A | LYS37 |
| A | SO4201 |
| A | SO4201 |
| A | HOH312 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 203 |
| Chain | Residue |
| A | ARG61 |
| A | LYS111 |
| A | LYS122 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 A 204 |
| Chain | Residue |
| A | GLY106 |
| A | PRO107 |
| A | MET108 |
| A | GLN109 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL A 205 |
| Chain | Residue |
| A | LYS37 |
| A | ARG54 |
| A | ARG61 |
| A | PRO141 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 3 |
| Details | ACT_SITE: ACT_SITE => ECO:0000255|HAMAP-Rule:MF_00034, ECO:0000305|PubMed:23118486, ECO:0000305|PubMed:23980027, ECO:0000305|PubMed:31506434 |
| Chain | Residue | Details |
| A | ASP7 | |
| A | GLU70 | |
| A | HIS143 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | ACT_SITE: ACT_SITE => ECO:0000305|PubMed:23118486 |
| Chain | Residue | Details |
| A | ASN146 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00034, ECO:0000269|PubMed:23118486, ECO:0000312|PDB:4EP4 |
| Chain | Residue | Details |
| A | ASP7 | |
| A | HIS143 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:23980027, ECO:0000269|PubMed:31506434, ECO:0000312|PDB:4LD0, ECO:0000312|PDB:6S16 |
| Chain | Residue | Details |
| A | ILE10 | |
| A | PRO40 | |
| A | ARG47 | |
| A | LYS83 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00034 |
| Chain | Residue | Details |
| A | GLU70 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:23980027, ECO:0000269|PubMed:31506434, ECO:0000305|PubMed:23118486, ECO:0000312|PDB:4LD0 |
| Chain | Residue | Details |
| A | PHE73 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:23980027, ECO:0000269|PubMed:31506434, ECO:0000312|PDB:4LD0 |
| Chain | Residue | Details |
| A | ARG76 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:31506434, ECO:0000305|PubMed:23980027, ECO:0000312|PDB:6S16 |
| Chain | Residue | Details |
| A | LEU80 |
| site_id | SWS_FT_FI9 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:23980027, ECO:0000312|PDB:4LD0 |
| Chain | Residue | Details |
| A | MET108 | |
| A | ARG140 |
