Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0001882 | molecular_function | nucleoside binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006281 | biological_process | DNA repair |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE 0R6 A 901 |
Chain | Residue |
A | ARG573 |
A | ARG659 |
A | ARG660 |
A | LYS663 |
A | THR664 |
A | PHE667 |
A | ASP785 |
A | MG902 |
A | MG903 |
A | HOH1001 |
A | HOH1011 |
A | ARG587 |
A | HOH1030 |
A | HOH1050 |
A | HOH1063 |
A | HOH1126 |
B | DDG112 |
B | GOL204 |
C | DG204 |
A | ASP610 |
A | TYR611 |
A | SER612 |
A | GLN613 |
A | ILE614 |
A | GLU615 |
A | HIS639 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 902 |
Chain | Residue |
A | ASP610 |
A | TYR611 |
A | ASP785 |
A | 0R6901 |
A | MG903 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG A 903 |
Chain | Residue |
A | ASP610 |
A | ASP785 |
A | 0R6901 |
A | MG902 |
A | HOH1001 |
A | HOH1003 |
B | DDG112 |
site_id | AC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 904 |
Chain | Residue |
A | ARG660 |
A | LYS663 |
A | LYS831 |
A | HOH1050 |
A | HOH1126 |
A | HOH1305 |
B | DDG112 |
site_id | AC5 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 905 |
Chain | Residue |
A | THR544 |
A | TYR545 |
A | PRO579 |
A | ASN580 |
A | ASN583 |
A | HOH1108 |
A | HOH1248 |
C | DC209 |
C | DC210 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE PGE A 906 |
Chain | Residue |
A | THR447 |
A | ARG559 |
A | ARG778 |
site_id | AC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 907 |
Chain | Residue |
A | ASP452 |
A | TYR455 |
A | TYR455 |
A | ARG596 |
A | ARG596 |
A | ASP826 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 908 |
Chain | Residue |
A | ASP371 |
A | TRP417 |
A | ARG435 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 909 |
Chain | Residue |
A | PRO501 |
A | ALA521 |
A | GLU694 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT A 910 |
Chain | Residue |
A | GLN489 |
A | ARG492 |
A | VAL493 |
A | GLU497 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 911 |
Chain | Residue |
A | ARG313 |
A | TRP318 |
A | LEU552 |
A | HOH1046 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 912 |
Chain | Residue |
A | TRP645 |
A | MET646 |
A | PHE647 |
A | GLY648 |
A | ILE684 |
site_id | BC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 913 |
Chain | Residue |
A | ARG425 |
A | TRP428 |
A | HOH1028 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PGE B 201 |
Chain | Residue |
A | GLU337 |
A | PRO338 |
A | TYR339 |
A | LYS340 |
B | DG101 |
site_id | BC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG B 202 |
Chain | Residue |
B | HOH327 |
B | HOH329 |
B | HOH330 |
B | HOH331 |
C | HOH440 |
site_id | BC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL B 203 |
Chain | Residue |
B | DC109 |
B | HOH312 |
B | HOH314 |
C | DC210 |
C | HOH403 |
A | LYS540 |
A | HOH1292 |
B | DG107 |
B | DG108 |
site_id | BC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL B 204 |
Chain | Residue |
A | ARG587 |
A | THR664 |
A | 0R6901 |
B | DC111 |
B | DDG112 |
B | HOH325 |
C | DG204 |
site_id | BC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ACT C 301 |
Chain | Residue |
C | DC207 |
C | DG208 |
C | HOH410 |
C | HOH429 |
C | HOH434 |
C | HOH440 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL C 302 |
Chain | Residue |
A | ARG728 |
C | DG206 |
C | DC207 |
C | HOH417 |
site_id | CC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL C 303 |
Chain | Residue |
B | DC103 |
C | DG213 |
C | DG214 |
site_id | CC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 304 |
Chain | Residue |
C | DC205 |
C | DG206 |
C | HOH402 |
C | HOH407 |
C | HOH419 |
Functional Information from PROSITE/UniProt
site_id | PS00447 |
Number of Residues | 20 |
Details | DNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL |
Chain | Residue | Details |
A | ARG659-LEU678 | |