4ELU
Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing modified pyrimidines
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2010-04-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 108.209, 108.209, 90.397 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.856 - 1.800 |
R-factor | 0.1567 |
Rwork | 0.155 |
R-free | 0.18250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ojs |
RMSD bond length | 0.006 |
RMSD bond angle | 1.188 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX (dev_1009) |
Refinement software | PHENIX ((phenix.refine: dev_1009)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.900 |
High resolution limit [Å] | 1.790 | 1.790 |
Rmerge | 0.065 | 0.724 |
Number of reflections | 57268 | |
<I/σ(I)> | 2.01 | |
Completeness [%] | 99.5 | 97.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | 50 mM Na cacodylate pH=6.5, 0.2 M NH4(OAc), 10 mM Mg(OAc)2, 28% PEG 8000, VAPOR DIFFUSION, HANGING DROP, temperature 291K |