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4EDK

The structure of the S. aureus DnaG RNA Polymerase Domain bound to GTP and Manganese

Functional Information from GO Data
ChainGOidnamespacecontents
A0003896molecular_functionDNA primase activity
A0006269biological_processDNA replication, synthesis of primer
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE BEN A 501
ChainResidue
AGLU117
AGLU124
APHE125
AVAL134
AHOH747
AHOH841

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE BEN A 502
ChainResidue
ALYS321
AHIS325
AHOH877
AGLN289
ALEU290
AASP292

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BEN A 503
ChainResidue
AGLY287
AGTP504
AHOH908

site_idAC4
Number of Residues24
DetailsBINDING SITE FOR RESIDUE GTP A 504
ChainResidue
AARG146
AARG222
APRO229
ALYS230
ATYR231
AGLU266
AGLY267
APHE268
AMET269
AGLY287
AASP310
AASP343
ABEN503
AMN506
AMN507
AHOH610
AHOH643
AHOH647
AHOH658
AHOH729
AHOH817
AHOH867
AHOH899
AHOH941

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN A 505
ChainResidue
AASP312
AHOH890
AHOH891
AHOH892
AHOH899
AHOH901
AHOH903

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 506
ChainResidue
AASP310
AASP343
AGTP504
AMN507
AHOH836
AHOH894

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 507
ChainResidue
AASP343
AGTP504
AMN506
AHOH647
AHOH657
AHOH893

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00974
ChainResidueDetails
AGLU266
AASP310
AASP312

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PDB entries from 2024-07-10

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