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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

4E8R

Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 402

Chain	Residue
A	G3
A	U4

site_id	AC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 403

Chain	Residue
A	G136
A	U225

site_id	AC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE MG A 404

Chain	Residue
A	A290
A	U387
A	G388

site_id	AC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 405

Chain	Residue
A	U221

site_id	AC5
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 406

Chain	Residue
A	G374
A	C360

site_id	AC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 407

Chain	Residue
A	G46
A	U47

site_id	AC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 408

Chain	Residue
A	G107

site_id	AC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 409

Chain	Residue
A	C372
A	G373

site_id	AC9
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 410

Chain	Residue
A	HOH920

site_id	BC1
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 411

Chain	Residue
A	A105

site_id	BC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 412

Chain	Residue
A	U66
A	A67

site_id	BC3
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 413

Chain	Residue
A	G284

site_id	BC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 414

Chain	Residue
A	G169

site_id	BC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE MG A 415

Chain	Residue
A	U66
A	A67
A	G68
A	A120
A	HOH908

site_id	BC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 416

Chain	Residue
A	A355
A	A356

site_id	BC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 417

Chain	Residue
A	G288
A	G382
A	G383
A	HOH922

site_id	BC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE MG A 418

Chain	Residue
A	G142

site_id	BC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 419

Chain	Residue
A	G374
A	U375
A	C377
A	MG420

site_id	CC1
Number of Residues	4
Details	BINDING SITE FOR RESIDUE MG A 420

Chain	Residue
A	C358
A	G359
A	C377
A	MG419

site_id	CC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 422

Chain	Residue
A	A283
A	HOH912

site_id	CC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE MG A 423

Chain	Residue
A	G324
A	G325

site_id	CC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 424

Chain	Residue
A	G15
A	G16
A	U255
A	U256

site_id	CC5
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CS A 425

Chain	Residue
A	G385

site_id	CC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 426

Chain	Residue
A	G133
A	A134
A	G135

site_id	CC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CS A 427

Chain	Residue
A	G58

site_id	CC8
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 428

Chain	Residue
A	G29
A	G30

site_id	CC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 429

Chain	Residue
A	U273
A	G274
A	G275

site_id	DC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE CS A 430

Chain	Residue
A	U13
A	A110
A	G111
A	C112
A	EPE462

site_id	DC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 431

Chain	Residue
A	G266
A	G267
A	HOH906

site_id	DC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 432

Chain	Residue
A	G320
A	G321

site_id	DC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 433

Chain	Residue
A	A333
A	G335
A	G336

site_id	DC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 434

Chain	Residue
A	U4
A	G107
A	U375
A	A376

site_id	DC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 435

Chain	Residue
A	G275
A	A277

site_id	DC7
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 436

Chain	Residue
A	G264
A	G265

site_id	DC8
Number of Residues	5
Details	BINDING SITE FOR RESIDUE CS A 437

Chain	Residue
A	C86
A	G87
A	A95
A	U96
A	G97

site_id	DC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 438

Chain	Residue
A	G3
A	U4
A	G5
A	A376

site_id	EC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 439

Chain	Residue
A	G79
A	G80

site_id	EC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 440

Chain	Residue
A	G32
A	A33
A	G34
A	A50

site_id	EC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 441

Chain	Residue
A	C358
A	G359
A	C377

site_id	EC4
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 442

Chain	Residue
A	U332
A	G331

site_id	EC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 443

Chain	Residue
A	U88
A	G89
A	G90

site_id	EC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 444

Chain	Residue
A	C119
A	A174
A	U238
A	G239

site_id	EC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 445

Chain	Residue
A	G80
A	G81
A	A100
A	U101

site_id	EC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 446

Chain	Residue
A	G128
A	G129
A	U238

site_id	EC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE CS A 447

Chain	Residue
A	A268
A	G269
A	G270
A	HOH921

site_id	FC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 448

Chain	Residue
A	G52
A	G203

site_id	FC2
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CS A 449

Chain	Residue
A	G378

site_id	FC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 450

Chain	Residue
A	A95
A	A283
A	G284

site_id	FC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CS A 451

Chain	Residue
A	G194

site_id	FC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 452

Chain	Residue
A	A120
A	U238
A	G239

site_id	FC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CS A 454

Chain	Residue
A	G32
A	G34

site_id	FC7
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CS A 455

Chain	Residue
A	G58

site_id	FC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE CS A 456

Chain	Residue
A	G58

site_id	FC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 457

Chain	Residue
A	C358
A	A376
A	C377

site_id	GC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE CS A 458

Chain	Residue
A	C337
A	C345
A	C346

site_id	GC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE EPE A 459

Chain	Residue
A	G314
A	G315
A	G316
A	G317

site_id	GC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE EPE A 460

Chain	Residue
A	C116
A	G117

site_id	GC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE EPE A 461

Chain	Residue
A	C38
A	G242
A	G243
A	G244

site_id	GC5
Number of Residues	8
Details	BINDING SITE FOR RESIDUE EPE A 462

Chain	Residue
A	G14
A	U71
A	G111
A	C112
A	G113
A	G114
A	A115
A	CS430

site_id	GC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE EPE A 463

Chain	Residue
A	U96
A	G97
A	G98
A	HOH904
A	HOH905

246704

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