4E69
Crystal structure of a sugar kinase (target EFI-502132) from Oceanicola granulosus, unliganded structure
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005829 | cellular_component | cytosol |
| A | 0006974 | biological_process | DNA damage response |
| A | 0008673 | molecular_function | 2-dehydro-3-deoxygluconokinase activity |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016310 | biological_process | phosphorylation |
| A | 0016772 | molecular_function | transferase activity, transferring phosphorus-containing groups |
| A | 0019698 | biological_process | D-galacturonate catabolic process |
| A | 0042840 | biological_process | D-glucuronate catabolic process |
| A | 0046835 | biological_process | carbohydrate phosphorylation |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005829 | cellular_component | cytosol |
| B | 0006974 | biological_process | DNA damage response |
| B | 0008673 | molecular_function | 2-dehydro-3-deoxygluconokinase activity |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016310 | biological_process | phosphorylation |
| B | 0016772 | molecular_function | transferase activity, transferring phosphorus-containing groups |
| B | 0019698 | biological_process | D-galacturonate catabolic process |
| B | 0042840 | biological_process | D-glucuronate catabolic process |
| B | 0046835 | biological_process | carbohydrate phosphorylation |
| B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL A 401 |
| Chain | Residue |
| A | GLN233 |
| A | LEU272 |
| A | HOH656 |
| B | ASN-6 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL A 402 |
| Chain | Residue |
| A | ARG165 |
| A | PRO166 |
| A | ARG167 |
| A | GOL407 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CL A 403 |
| Chain | Residue |
| B | GLN233 |
| B | LEU272 |
| A | ASN-6 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL A 404 |
| Chain | Residue |
| A | ARG141 |
| A | ALA170 |
| A | GLU174 |
| A | HOH547 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 405 |
| Chain | Residue |
| A | PRO166 |
| A | GLY171 |
| A | THR172 |
| A | HOH704 |
| A | HOH804 |
| B | HOH614 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 406 |
| Chain | Residue |
| A | THR172 |
| A | TRP199 |
| A | HOH562 |
| A | HOH838 |
| B | ALA197 |
| B | ASP202 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 407 |
| Chain | Residue |
| A | TYR86 |
| A | PHE97 |
| A | TYR99 |
| A | ARG101 |
| A | ARG165 |
| A | ARG167 |
| A | CL402 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CL B 401 |
| Chain | Residue |
| B | ASP29 |
| B | ARG165 |
| B | HOH608 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CL B 402 |
| Chain | Residue |
| B | ARG165 |
| B | PRO166 |
| B | ARG167 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO B 403 |
| Chain | Residue |
| B | GLY225 |
| B | PHE258 |
| B | HOH630 |
| site_id | BC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL B 404 |
| Chain | Residue |
| A | GLY201 |
| A | ASP202 |
| A | HOH664 |
| B | LEU164 |
| B | GLU194 |
| B | ASP195 |
| B | TRP199 |
| B | HOH748 |
Functional Information from PROSITE/UniProt
| site_id | PS00584 |
| Number of Residues | 14 |
| Details | PFKB_KINASES_2 pfkB family of carbohydrate kinases signature 2. DTtAAGDsfnAGLL |
| Chain | Residue | Details |
| A | ASP250-LEU263 |
