4E1J
Crystal structure of glycerol kinase in complex with glycerol from Sinorhizobium meliloti 1021
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004370 | molecular_function | glycerol kinase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005829 | cellular_component | cytosol |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0006071 | biological_process | glycerol metabolic process |
| A | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016310 | biological_process | phosphorylation |
| A | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
| A | 0019563 | biological_process | glycerol catabolic process |
| B | 0004370 | molecular_function | glycerol kinase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005829 | cellular_component | cytosol |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0006071 | biological_process | glycerol metabolic process |
| B | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016310 | biological_process | phosphorylation |
| B | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
| B | 0019563 | biological_process | glycerol catabolic process |
| C | 0004370 | molecular_function | glycerol kinase activity |
| C | 0005524 | molecular_function | ATP binding |
| C | 0005829 | cellular_component | cytosol |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0006071 | biological_process | glycerol metabolic process |
| C | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
| C | 0016301 | molecular_function | kinase activity |
| C | 0016310 | biological_process | phosphorylation |
| C | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
| C | 0019563 | biological_process | glycerol catabolic process |
| D | 0004370 | molecular_function | glycerol kinase activity |
| D | 0005524 | molecular_function | ATP binding |
| D | 0005829 | cellular_component | cytosol |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0006071 | biological_process | glycerol metabolic process |
| D | 0006072 | biological_process | glycerol-3-phosphate metabolic process |
| D | 0016301 | molecular_function | kinase activity |
| D | 0016310 | biological_process | phosphorylation |
| D | 0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor |
| D | 0019563 | biological_process | glycerol catabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A 601 |
| Chain | Residue |
| A | ARG105 |
| A | GLU106 |
| A | TRP125 |
| A | TYR157 |
| A | ASP266 |
| A | GLN267 |
| A | PHE291 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE NA A 602 |
| Chain | Residue |
| A | MSE23 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL B 601 |
| Chain | Residue |
| B | GLU106 |
| B | TRP125 |
| B | TYR157 |
| B | ASP266 |
| B | GLN267 |
| B | PHE291 |
| B | ARG105 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL C 601 |
| Chain | Residue |
| C | ALA488 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL C 602 |
| Chain | Residue |
| C | ARG105 |
| C | GLU106 |
| C | TRP125 |
| C | TYR157 |
| C | ASP266 |
| C | GLN267 |
| C | PHE291 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE NA C 603 |
| Chain | Residue |
| C | SER486 |
| C | HOH704 |
Functional Information from PROSITE/UniProt
| site_id | PS00445 |
| Number of Residues | 21 |
| Details | FGGY_KINASES_2 FGGY family of carbohydrate kinases signature 2. GaIFGMtrntgpa.EFARAALE |
| Chain | Residue | Details |
| A | GLY383-GLU403 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 48 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00186 |
| Chain | Residue | Details |
| A | THR35 | |
| A | GLY331 | |
| A | GLN335 | |
| A | GLY434 | |
| B | THR35 | |
| B | THR36 | |
| B | SER37 | |
| B | ARG39 | |
| B | ARG105 | |
| B | GLU106 | |
| B | TYR157 | |
| A | THR36 | |
| B | ASP266 | |
| B | THR288 | |
| B | GLY331 | |
| B | GLN335 | |
| B | GLY434 | |
| C | THR35 | |
| C | THR36 | |
| C | SER37 | |
| C | ARG39 | |
| C | ARG105 | |
| A | SER37 | |
| C | GLU106 | |
| C | TYR157 | |
| C | ASP266 | |
| C | THR288 | |
| C | GLY331 | |
| C | GLN335 | |
| C | GLY434 | |
| D | THR35 | |
| D | THR36 | |
| D | SER37 | |
| A | ARG39 | |
| D | ARG39 | |
| D | ARG105 | |
| D | GLU106 | |
| D | TYR157 | |
| D | ASP266 | |
| D | THR288 | |
| D | GLY331 | |
| D | GLN335 | |
| D | GLY434 | |
| A | ARG105 | |
| A | GLU106 | |
| A | TYR157 | |
| A | ASP266 | |
| A | THR288 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00186, ECO:0000269|Ref.4, ECO:0007744|PDB:4E1J |
| Chain | Residue | Details |
| A | GLN267 | |
| B | GLN267 | |
| C | GLN267 | |
| D | GLN267 |
