4DPU
Crystal structure of Staphylococcus epidermidis S192A mevalonate diphosphate decarboxylase complexed with inhibitor 6-FMVAPP and ATPgS
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004163 | molecular_function | diphosphomevalonate decarboxylase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005829 | cellular_component | cytosol |
A | 0006629 | biological_process | lipid metabolic process |
A | 0008299 | biological_process | isoprenoid biosynthetic process |
A | 0016301 | molecular_function | kinase activity |
A | 0016310 | biological_process | phosphorylation |
A | 0016829 | molecular_function | lyase activity |
A | 0016831 | molecular_function | carboxy-lyase activity |
A | 0019287 | biological_process | isopentenyl diphosphate biosynthetic process, mevalonate pathway |
B | 0004163 | molecular_function | diphosphomevalonate decarboxylase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005829 | cellular_component | cytosol |
B | 0006629 | biological_process | lipid metabolic process |
B | 0008299 | biological_process | isoprenoid biosynthetic process |
B | 0016301 | molecular_function | kinase activity |
B | 0016310 | biological_process | phosphorylation |
B | 0016829 | molecular_function | lyase activity |
B | 0016831 | molecular_function | carboxy-lyase activity |
B | 0019287 | biological_process | isopentenyl diphosphate biosynthetic process, mevalonate pathway |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE FM0 A 401 |
Chain | Residue |
A | ALA14 |
A | MET196 |
A | ASP283 |
A | ALA284 |
A | AGS402 |
A | HOH579 |
A | HOH693 |
A | TYR18 |
A | TRP19 |
A | LYS21 |
A | SER139 |
A | GLY140 |
A | SER141 |
A | ARG144 |
A | ARG193 |
site_id | AC2 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE AGS A 402 |
Chain | Residue |
A | THR43 |
A | LEU60 |
A | GLU69 |
A | LYS72 |
A | SER94 |
A | ASN96 |
A | ALA105 |
A | SER106 |
A | SER107 |
A | ALA108 |
A | ALA110 |
A | SER141 |
A | FM0401 |
A | HOH590 |
A | HOH662 |
A | HOH678 |
A | HOH693 |
A | HOH700 |
A | HOH715 |
A | HOH733 |
site_id | AC3 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE FM0 B 401 |
Chain | Residue |
B | ALA14 |
B | TYR18 |
B | TRP19 |
B | LYS21 |
B | SER107 |
B | SER139 |
B | GLY140 |
B | SER141 |
B | ARG144 |
B | ALA192 |
B | ARG193 |
B | MET196 |
B | ASP283 |
B | ALA284 |
B | AGS402 |
B | HOH566 |
B | HOH615 |
B | HOH673 |
B | HOH724 |
site_id | AC4 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE AGS B 402 |
Chain | Residue |
B | THR43 |
B | LEU60 |
B | GLU69 |
B | SER94 |
B | ASN96 |
B | ALA105 |
B | SER106 |
B | SER107 |
B | ALA110 |
B | SER141 |
B | SER191 |
B | ALA192 |
B | FM0401 |
B | HOH570 |
B | HOH626 |
B | HOH673 |
B | HOH754 |