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4DN5

Crystal Structure of NF-kB-inducing Kinase (NIK)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004672molecular_functionprotein kinase activity
A0004674molecular_functionprotein serine/threonine kinase activity
A0005524molecular_functionATP binding
A0006468biological_processprotein phosphorylation
B0004672molecular_functionprotein kinase activity
B0004674molecular_functionprotein serine/threonine kinase activity
B0005524molecular_functionATP binding
B0006468biological_processprotein phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1001
ChainResidue
AASN520
AASP534
AAGS1008
AHOH1118
AHOH1119

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 1002
ChainResidue
ASER621
ACYS622
BPRO675

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1003
ChainResidue
AARG666
AGLN479

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1004
ChainResidue
AARG491
AASP526

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE EDO A 1005
ChainResidue
AGLU392

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1006
ChainResidue
APHE411
AARG437
AGLY536
AHIS537
AAGS1008
BARG368

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1007
ChainResidue
AARG571
AGLU637
BTHR422
BGLY423

site_idAC8
Number of Residues24
DetailsBINDING SITE FOR RESIDUE AGS A 1008
ChainResidue
AGLY407
AGLY409
ASER410
APHE411
AGLY412
AVAL414
AALA427
ALYS429
AMET469
AGLU470
ALEU472
ASER476
AGLN479
AASP515
AASP519
AASN520
ALEU522
AASP534
AHIS537
AMG1001
AEDO1006
AHOH1118
AHOH1119
AHOH1129

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1001
ChainResidue
BASN520
BASP534
BAGS1003
BHOH1108
BHOH1109

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 1002
ChainResidue
BGLU440
BMET469
BCYS533
BASP534
BPHE535
BAGS1003

site_idBC2
Number of Residues22
DetailsBINDING SITE FOR RESIDUE AGS B 1003
ChainResidue
BGLY407
BGLY409
BSER410
BPHE411
BGLY412
BVAL414
BLYS429
BMET469
BGLU470
BLEU472
BSER476
BASP515
BASP519
BASN520
BLEU522
BASP534
BHIS537
BMG1001
BEDO1002
BHOH1108
BHOH1109
BHOH1122

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues25
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGRGSFGEVHrMedkqtgfqc.........AVKK
ChainResidueDetails
ALEU406-LYS430

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IlHgDVKadNVLL
ChainResidueDetails
AILE511-LEU523

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10027
ChainResidueDetails
AASP515
BASP515

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00159
ChainResidueDetails
ALEU406
ALYS429
BLEU406
BLYS429

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000269|PubMed:20682767
ChainResidueDetails
ATHR559
BTHR559

224572

PDB entries from 2024-09-04

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