4DLA
Crystal structure of S-nitrosoglutathione reductase apoenzyme from tomato (Solanum lycopersicum)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0004022 | molecular_function | alcohol dehydrogenase (NAD+) activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0008270 | molecular_function | zinc ion binding |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0044281 | biological_process | small molecule metabolic process |
A | 0046294 | biological_process | formaldehyde catabolic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0051903 | molecular_function | S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity |
B | 0000166 | molecular_function | nucleotide binding |
B | 0004022 | molecular_function | alcohol dehydrogenase (NAD+) activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0008270 | molecular_function | zinc ion binding |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0044281 | biological_process | small molecule metabolic process |
B | 0046294 | biological_process | formaldehyde catabolic process |
B | 0046872 | molecular_function | metal ion binding |
B | 0051903 | molecular_function | S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 401 |
Chain | Residue |
A | CYS47 |
A | HIS69 |
A | CYS177 |
A | HOH701 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN A 402 |
Chain | Residue |
A | CYS99 |
A | CYS102 |
A | CYS105 |
A | CYS113 |
site_id | AC3 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL A 403 |
Chain | Residue |
A | ARG221 |
A | ASP259 |
A | LEU260 |
A | THR261 |
A | ASP262 |
A | HOH565 |
A | HOH667 |
A | THR9 |
site_id | AC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE GOL A 404 |
Chain | Residue |
A | LEU169 |
A | GLU170 |
A | HOH654 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 405 |
Chain | Residue |
A | GLU212 |
A | LYS341 |
A | GLU342 |
A | HOH602 |
A | HOH697 |
site_id | AC6 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GOL A 406 |
Chain | Residue |
A | GLU60 |
A | LEU62 |
A | THR120 |
A | GLY121 |
A | GLY123 |
A | HIS142 |
A | PHE143 |
A | MET144 |
A | HOH556 |
A | HOH660 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 401 |
Chain | Residue |
B | CYS47 |
B | HIS69 |
B | CYS177 |
B | HOH551 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN B 402 |
Chain | Residue |
B | CYS99 |
B | CYS102 |
B | CYS105 |
B | CYS113 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL B 403 |
Chain | Residue |
B | GLU212 |
B | LYS341 |
B | GLU342 |
B | HOH637 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL B 404 |
Chain | Residue |
B | HIS48 |
B | THR205 |
B | VAL206 |
B | ARG372 |
B | HOH542 |
site_id | BC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL B 405 |
Chain | Residue |
B | TRP187 |
B | ALA217 |
site_id | BC3 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 406 |
Chain | Residue |
B | GLU60 |
B | THR120 |
B | GLY121 |
B | GLY123 |
B | HIS142 |
B | PHE143 |
B | MET144 |
B | GOL408 |
site_id | BC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL B 407 |
Chain | Residue |
A | ASN127 |
A | ASP128 |
A | LYS130 |
B | LYS171 |
B | ASP346 |
B | ILE349 |
B | ASN352 |
site_id | BC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL B 408 |
Chain | Residue |
B | THR49 |
B | THR53 |
B | ASP58 |
B | GOL406 |
Functional Information from PROSITE/UniProt
site_id | PS00059 |
Number of Residues | 15 |
Details | ADH_ZINC Zinc-containing alcohol dehydrogenases signature. GHEaAGIvesvGegV |
Chain | Residue | Details |
A | GLY68-VAL82 |