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4D90

Crystal Structure of Del-1 EGF domains

Functional Information from GO Data
ChainGOidnamespacecontents
A0005509molecular_functioncalcium ion binding
B0005509molecular_functioncalcium ion binding
Functional Information from PROSITE/UniProt
site_idPS00010
Number of Residues12
DetailsASX_HYDROXYL Aspartic acid and asparagine hydroxylation site. CtDlvanYsCeC
ChainResidueDetails
ACYS134-CYS145

site_idPS00022
Number of Residues12
DetailsEGF_1 EGF-like domain signature 1. CkCprGfnGIhC
ChainResidueDetails
ACYS105-CYS116
ACYS143-CYS154

site_idPS01186
Number of Residues12
DetailsEGF_2 EGF-like domain signature 2. CeCpdGFtdpn....C
ChainResidueDetails
ACYS48-CYS59
ACYS105-CYS116

site_idPS01187
Number of Residues25
DetailsEGF_CA Calcium-binding EGF-like domain signature. NiNECevep..........Cknggi..CtDlvanYsC
ChainResidueDetails
AASN119-CYS143

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues86
DetailsDomain: {"description":"EGF-like 2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00076","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues72
DetailsDomain: {"description":"EGF-like 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00076","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsMotif: {"description":"Cell attachment site"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues10
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsGlycosylation: {"description":"O-linked (GalNAc...) threonine","evidences":[{"source":"PubMed","id":"22601780","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsGlycosylation: {"description":"O-linked (Fuc...) threonine","evidences":[{"source":"PubMed","id":"22601780","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues2
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"22601780","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

238582

PDB entries from 2025-07-09

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