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4D2I

Crystal structure of the HerA hexameric DNA translocase from Sulfolobus solfataricus bound to AMP-PNP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003677molecular_functionDNA binding
A0004386molecular_functionhelicase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0016787molecular_functionhydrolase activity
A0016853molecular_functionisomerase activity
A0016887molecular_functionATP hydrolysis activity
A0043138molecular_function3'-5' DNA helicase activity
A0043139molecular_function5'-3' DNA helicase activity
B0000166molecular_functionnucleotide binding
B0003677molecular_functionDNA binding
B0004386molecular_functionhelicase activity
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0006281biological_processDNA repair
B0006974biological_processDNA damage response
B0016787molecular_functionhydrolase activity
B0016853molecular_functionisomerase activity
B0016887molecular_functionATP hydrolysis activity
B0043138molecular_function3'-5' DNA helicase activity
B0043139molecular_function5'-3' DNA helicase activity
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE ANP A 1477
ChainResidue
ATHR150
ALYS459
AILE460
AASP461
AMET462
AMG1478
AHOH2027
AHOH2029
AHOH2030
BARG142
AGLY151
ASER152
AGLY153
ALYS154
ASER155
AASN156
AVAL442
AGLY443

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE ANP B 1478
ChainResidue
AARG142
ASER246
AHOH2022
BTHR150
BGLY151
BSER152
BGLY153
BLYS154
BSER155
BASN156
BVAL442
BGLY443
BILE460
BMET462
BMG1479
BHOH2012
BHOH2013

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1478
ChainResidue
ASER155
AGLU180
AANP1477
AHOH2029
AHOH2030
AHOH2031

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1479
ChainResidue
BSER155
BANP1478
BHOH2012
BHOH2013
BHOH2014

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"25420454","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4D2I","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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