Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4CS4

Catalytic domain of Pyrrolysyl-tRNA synthetase mutant Y306A, Y384F in complex with AMPPNP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0005524molecular_functionATP binding
A0043039biological_processtRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues24
DetailsBINDING SITE FOR RESIDUE ANP A 1457
ChainResidue
AARG330
ASER399
AGLY421
AGLY423
AARG426
AEDO1477
AMG1478
AMG1479
AAXZ1480
AHOH2056
AHOH2057
AGLU332
AHOH2074
AHOH2106
AHOH2109
AHOH2120
AHOH2121
AHIS338
ALEU339
APHE342
AMET344
AGLU396
ALEU397
ASER398

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1458
ChainResidue
AGLU247
ALYS263
ATHR343
AARG442
AHOH2032
AHOH2034

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1459
ChainResidue
ATYR242
ALYS245
AGLU249
ALYS431
AHIS432
AHOH2031

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1460
ChainResidue
AALA302
AALA306
AEDO1461
AEDO1462

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1461
ChainResidue
AMET276
AASP408
ATRP411
AILE413
AEDO1460

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1462
ChainResidue
AASN346
AEDO1460

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1463
ChainResidue
AGLU274
AILE278
AASP279
AASN280
ASER285

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1464
ChainResidue
AVAL383
APRO406
ALEU407
AHOH2102

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1465
ChainResidue
AMET300
ALEU301
AALA302
AASN346
AAXZ1480

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1466
ChainResidue
AASP386
ATHR387
AVAL401
AVAL402

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1467
ChainResidue
AGLU240
ALYS245
AARG248
AGLU249
AARG252
ALYS293
AEDO1471
AHOH2036

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1468
ChainResidue
ALYS429
AASP433
APHE434
ALYS435

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1469
ChainResidue
ATYR235
AGLY258
AHOH2072
AHOH2073

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1470
ChainResidue
AGLY351
ASER352
AGLY353
ACYS354
APRO416
AHOH2085

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1471
ChainResidue
AGLU238
ALYS245
ALYS293
AEDO1467
AHOH2036

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1472
ChainResidue
AVAL200
ASER445
ATYR446
ASER451
AASN453

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1473
ChainResidue
AGLU341
AHOH2080
ALEU339
AGLU340

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 1474
ChainResidue
ASER221
ASER225
ALYS228
APRO416
AHIS456

site_idCC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1475
ChainResidue
AARG257
APHE259
ALYS321
AGLN349
AASN358
AILE362
AHOH2054
AHOH2082

site_idCC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 1476
ChainResidue
AASN241
AARG439
AALA440
AALA441
AASN448
AGLY449
AHOH2115

site_idCC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 1477
ChainResidue
AHIS338
AASP394
AGLU396
AANP1457

site_idCC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1478
ChainResidue
AGLU396
ASER399
AANP1457
AHOH2104
AHOH2107

site_idCC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1479
ChainResidue
AANP1457
AHOH2056
AHOH2057
AHOH2074
AHOH2121

site_idCC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE AXZ A 1480
ChainResidue
AILE278
ALEU284
AGLN287
AILE288
APRO299
AMET300
AARG330
ACYS381
AVAL383
AANP1457
AEDO1465

site_idCC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 1481
ChainResidue
AARG310
ALYS311
AARG314
AASN453
AHIS455

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon