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4C2Y

Human N-myristoyltransferase (NMT1) with Myristoyl-CoA co-factor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
A0006499biological_processN-terminal protein myristoylation
B0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
B0006499biological_processN-terminal protein myristoylation
Functional Information from PDB Data
site_idAC1
Number of Residues37
DetailsBINDING SITE FOR RESIDUE MYA B 1497
ChainResidue
BARG115
BPHE247
BLEU248
BCYS249
BVAL250
BARG255
BSER256
BLYS257
BARG258
BVAL259
BALA260
BTYR117
BPRO261
BTHR268
BVAL271
BPHE277
BTYR281
BTHR282
BLEU287
BTYR479
BMG1498
BHOH2004
BGLN118
BHOH2224
BHOH2226
BHOH2402
BHOH2403
BHOH2404
BHOH2405
BHOH2406
BHOH2407
BPHE119
BTRP120
BASN179
BTYR180
BVAL181
BASN246

site_idAC2
Number of Residues37
DetailsBINDING SITE FOR RESIDUE MYA A 1497
ChainResidue
ATYR117
AGLN118
APHE119
ATRP120
AASN179
ATYR180
AVAL181
APHE247
ALEU248
ACYS249
AVAL250
AARG255
ASER256
ALYS257
AARG258
AVAL259
AALA260
APRO261
ATHR268
AVAL271
APHE277
AGLN278
ATYR281
ATHR282
ALEU287
ATYR479
AMG1498
AHOH2002
AHOH2217
AHOH2218
AHOH2378
AHOH2379
AHOH2380
AHOH2381
AHOH2382
AHOH2383
AHOH2384

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1498
ChainResidue
ALEU254
ASER256
ALYS257
AARG258
AVAL259
AMYA1497

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1498
ChainResidue
BLEU254
BSER256
BLYS257
BARG258
BVAL259
BMYA1497

site_idAC5
Number of Residues12
DetailsBINDING SITE FOR RESIDUE CIT B 1499
ChainResidue
BTHR122
BGLN123
BPRO124
BGLU139
BLYS142
BARG265
BALA336
BASN389
BALA390
BHOH2230
BHOH2286
BHOH2408

site_idAC6
Number of Residues14
DetailsBINDING SITE FOR RESIDUE CIT A 1499
ChainResidue
AGLN123
APRO124
AGLU139
ALYS142
AARG265
AALA336
AASN389
AALA390
AHOH2222
AHOH2273
AHOH2274
AHOH2385
AHOH2386
ATHR122

site_idAC7
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 1500
ChainResidue
APRO126
ALYS289
APRO290
AVAL291
ALEU478
ATRP481
ALYS482
ACYS483
ASER485
AHOH2243

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 1501
ChainResidue
ATYR296
ATYR401
ALEU403
ALEU474
ALEU495
AGLN496
AHOH2238

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 1502
ChainResidue
AASP183
APHE188
AHOH2118
AHOH2389

site_idBC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL B 1500
ChainResidue
BPRO126
BLYS289
BPRO290
BVAL291
BTYR477
BLEU478
BTRP481
BLYS482
BCYS483
BHOH2254

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL B 1501
ChainResidue
BASN133
BTHR134
BPRO149
BTRP158
BHOH2018
BHOH2051
BHOH2064
BHOH2066

site_idBC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 1502
ChainResidue
BTYR192
BTYR296
BTYR401
BLEU403
BLEU474
BLEU495
BGLN496
BHOH2247
BHOH2262

site_idBC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 1503
ChainResidue
APRO204
AGLY205
AGLU369
AHOH2138
BLEU207
BGLN209
BGLU274
BHOH2411
BHOH2412

Functional Information from PROSITE/UniProt
site_idPS00975
Number of Residues9
DetailsNMT_1 Myristoyl-CoA:protein N-myristoyltransferase signature 1. EINFLCvHK
ChainResidueDetails
AGLU244-LYS252

site_idPS00976
Number of Residues7
DetailsNMT_2 Myristoyl-CoA:protein N-myristoyltransferase signature 2. KFGiGDG
ChainResidueDetails
ALYS466-GLY472

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:25255805, ECO:0000269|PubMed:32111831, ECO:0000269|Ref.19
ChainResidueDetails
AGLN118
AARG258
AVAL259
AALA260
BGLN118
BARG258
BVAL259
BALA260

site_idSWS_FT_FI2
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:25255805, ECO:0000269|PubMed:32103017, ECO:0000269|PubMed:32111831, ECO:0000269|Ref.19
ChainResidueDetails
APHE119
BSER256
ATRP120
ALEU248
AVAL250
ASER256
BPHE119
BTRP120
BLEU248
BVAL250

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:32103017
ChainResidueDetails
APHE247
BPHE247

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:25255805, ECO:0000269|Ref.19
ChainResidueDetails
ACYS249
BCYS249

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PDB entries from 2024-07-24

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