| Chain | GOid | namespace | contents |
| A | 0005515 | molecular_function | protein binding |
| A | 0005764 | cellular_component | lysosome |
| A | 0005765 | cellular_component | lysosomal membrane |
| A | 0005768 | cellular_component | endosome |
| A | 0005769 | cellular_component | early endosome |
| A | 0005770 | cellular_component | late endosome |
| A | 0005776 | cellular_component | autophagosome |
| A | 0006886 | biological_process | intracellular protein transport |
| A | 0006914 | biological_process | autophagy |
| A | 0008333 | biological_process | endosome to lysosome transport |
| A | 0010008 | cellular_component | endosome membrane |
| A | 0015031 | biological_process | protein transport |
| A | 0016020 | cellular_component | membrane |
| A | 0016192 | biological_process | vesicle-mediated transport |
| A | 0030123 | cellular_component | AP-3 adaptor complex |
| A | 0030136 | cellular_component | clathrin-coated vesicle |
| A | 0030220 | biological_process | platelet formation |
| A | 0030897 | cellular_component | HOPS complex |
| A | 0031902 | cellular_component | late endosome membrane |
| A | 0032400 | biological_process | melanosome localization |
| A | 0032418 | biological_process | lysosome localization |
| A | 0033263 | cellular_component | CORVET complex |
| A | 0034058 | biological_process | endosomal vesicle fusion |
| A | 0035542 | biological_process | regulation of SNARE complex assembly |
| A | 0035751 | biological_process | regulation of lysosomal lumen pH |
| A | 0043473 | biological_process | pigmentation |
| A | 0048070 | biological_process | regulation of developmental pigmentation |
| A | 0048471 | cellular_component | perinuclear region of cytoplasm |
| A | 0071439 | cellular_component | clathrin complex |
| A | 0097352 | biological_process | autophagosome maturation |
| B | 0005515 | molecular_function | protein binding |
| B | 0005764 | cellular_component | lysosome |
| B | 0005765 | cellular_component | lysosomal membrane |
| B | 0005768 | cellular_component | endosome |
| B | 0005769 | cellular_component | early endosome |
| B | 0005770 | cellular_component | late endosome |
| B | 0005776 | cellular_component | autophagosome |
| B | 0006886 | biological_process | intracellular protein transport |
| B | 0006914 | biological_process | autophagy |
| B | 0008333 | biological_process | endosome to lysosome transport |
| B | 0010008 | cellular_component | endosome membrane |
| B | 0015031 | biological_process | protein transport |
| B | 0016020 | cellular_component | membrane |
| B | 0016192 | biological_process | vesicle-mediated transport |
| B | 0030123 | cellular_component | AP-3 adaptor complex |
| B | 0030136 | cellular_component | clathrin-coated vesicle |
| B | 0030220 | biological_process | platelet formation |
| B | 0030897 | cellular_component | HOPS complex |
| B | 0031902 | cellular_component | late endosome membrane |
| B | 0032400 | biological_process | melanosome localization |
| B | 0032418 | biological_process | lysosome localization |
| B | 0033263 | cellular_component | CORVET complex |
| B | 0034058 | biological_process | endosomal vesicle fusion |
| B | 0035542 | biological_process | regulation of SNARE complex assembly |
| B | 0035751 | biological_process | regulation of lysosomal lumen pH |
| B | 0043473 | biological_process | pigmentation |
| B | 0048070 | biological_process | regulation of developmental pigmentation |
| B | 0048471 | cellular_component | perinuclear region of cytoplasm |
| B | 0071439 | cellular_component | clathrin complex |
| B | 0097352 | biological_process | autophagosome maturation |
