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4BV2

CRYSTAL STRUCTURE OF SIR2 IN COMPLEX WITH THE INHIBITOR EX-527, 2'-O-ACETYL-ADP-RIBOSE AND DEACETYLATED P53-PEPTIDE

Functional Information from GO Data
ChainGOidnamespacecontents
A0003950molecular_functionNAD+ poly-ADP-ribosyltransferase activity
A0005737cellular_componentcytoplasm
A0008270molecular_functionzinc ion binding
A0016740molecular_functiontransferase activity
A0034979molecular_functionNAD-dependent protein lysine deacetylase activity
A0046872molecular_functionmetal ion binding
A0051287molecular_functionNAD binding
A0070403molecular_functionNAD+ binding
B0003950molecular_functionNAD+ poly-ADP-ribosyltransferase activity
B0005737cellular_componentcytoplasm
B0008270molecular_functionzinc ion binding
B0016740molecular_functiontransferase activity
B0034979molecular_functionNAD-dependent protein lysine deacetylase activity
B0046872molecular_functionmetal ion binding
B0051287molecular_functionNAD binding
B0070403molecular_functionNAD+ binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 1246
ChainResidue
ACYS124
ACYS127
ALYS129
ACYS148
ACYS151

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE OCZ A 1247
ChainResidue
AASN99
AILE100
AILE159
AOAD1248
ASER25
AILE30
APRO31
APHE33

site_idAC3
Number of Residues21
DetailsBINDING SITE FOR RESIDUE OAD A 1248
ChainResidue
AGLY21
AALA22
AGLY23
ATHR26
APRO27
AASP32
APHE33
AGLN98
AHIS116
APHE162
AGLY188
ASER189
ASER190
AVAL193
AASN214
ALEU215
AMET230
AASP231
AVAL232
AOCZ1247
ELYS3

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE OCZ B 1247
ChainResidue
BSER25
BILE30
BPRO31
BPHE33
BMET71
BGLN98
BASN99
BILE100
BASP101
BILE159
BOAD1248

site_idAC5
Number of Residues22
DetailsBINDING SITE FOR RESIDUE OAD B 1248
ChainResidue
BGLY21
BALA22
BGLY23
BTHR26
BPRO27
BASP32
BPHE33
BPHE48
BGLN98
BHIS116
BVAL160
BPHE162
BSER189
BSER190
BVAL193
BASN214
BLEU215
BMET230
BASP231
BVAL232
BOCZ1247
HLYS3

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 1249
ChainResidue
BCYS124
BCYS127
BLYS129
BCYS148
BCYS151

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"16905097","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues22
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"16905097","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2H4F","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15780941","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YC5","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"15780941","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16768447","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16905097","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18786399","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19801667","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21080423","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YC5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2H2D","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2H4F","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3D4B","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3JR3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3PDH","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"29474172","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsModified residue: {"description":"N6-methyllysine; by KMT5A; alternate","evidences":[{"source":"PubMed","id":"17707234","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"20870725","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"22864287","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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