Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003723 | molecular_function | RNA binding |
A | 0005515 | molecular_function | protein binding |
A | 0005829 | cellular_component | cytosol |
A | 0006364 | biological_process | rRNA processing |
A | 0008168 | molecular_function | methyltransferase activity |
A | 0008649 | molecular_function | rRNA methyltransferase activity |
A | 0008988 | molecular_function | rRNA (adenine-N6-)-methyltransferase activity |
A | 0015976 | biological_process | carbon utilization |
A | 0016740 | molecular_function | transferase activity |
A | 0032259 | biological_process | methylation |
A | 0036307 | molecular_function | 23S rRNA (adenine(2030)-N(6))-methyltransferase activity |
A | 0070475 | biological_process | rRNA base methylation |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0003723 | molecular_function | RNA binding |
B | 0005515 | molecular_function | protein binding |
B | 0005829 | cellular_component | cytosol |
B | 0006364 | biological_process | rRNA processing |
B | 0008168 | molecular_function | methyltransferase activity |
B | 0008649 | molecular_function | rRNA methyltransferase activity |
B | 0008988 | molecular_function | rRNA (adenine-N6-)-methyltransferase activity |
B | 0015976 | biological_process | carbon utilization |
B | 0016740 | molecular_function | transferase activity |
B | 0032259 | biological_process | methylation |
B | 0036307 | molecular_function | 23S rRNA (adenine(2030)-N(6))-methyltransferase activity |
B | 0070475 | biological_process | rRNA base methylation |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE SAM A 1281 |
Chain | Residue |
A | LEU2 |
A | GLY99 |
A | SER100 |
A | GLU118 |
A | LEU119 |
A | HIS120 |
A | ALA142 |
A | ASP143 |
A | GLY144 |
A | ASP164 |
A | HOH2002 |
A | TYR4 |
A | HOH2007 |
A | HOH2058 |
A | HOH2059 |
A | HIS6 |
A | LYS18 |
A | HIS19 |
A | THR41 |
A | HIS42 |
A | ALA43 |
A | GLY44 |
site_id | AC2 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 1282 |
Chain | Residue |
A | LYS30 |
A | LEU106 |
A | LEU107 |
A | LEU108 |
A | ARG109 |
A | HOH2120 |
A | HOH2239 |
A | HOH2240 |
B | ARG90 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PEG A 1283 |
Chain | Residue |
A | VAL199 |
A | LEU200 |
A | ARG201 |
A | ASP229 |
A | SER230 |
A | HOH2192 |
A | HOH2195 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 1284 |
Chain | Residue |
A | HIS13 |
A | MET235 |
A | EDO1285 |
A | HOH2066 |
A | HOH2067 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 1285 |
Chain | Residue |
A | HIS13 |
A | GLU63 |
A | EDO1284 |
A | HOH2020 |
A | HOH2071 |
A | HOH2072 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 1286 |
Chain | Residue |
A | VAL226 |
A | LEU227 |
A | VAL265 |
A | ALA267 |
A | THR269 |
A | HOH2231 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE EDO A 1287 |
Chain | Residue |
A | HIS6 |
A | HIS9 |
A | ASN12 |
A | ALA14 |
A | ASP15 |
A | MET235 |
A | HOH2004 |
A | HOH2023 |
site_id | AC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 1288 |
Chain | Residue |
A | ARG201 |
A | GLU223 |
A | HIS271 |
A | THR273 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 1289 |
Chain | Residue |
A | PRO228 |
A | ASP229 |
A | GLY270 |
A | HIS271 |
site_id | BC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 1290 |
Chain | Residue |
A | ARG128 |
A | PHE131 |
A | GLN132 |
A | VAL139 |
A | HOH2139 |
A | HOH2141 |
site_id | BC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 1291 |
Chain | Residue |
A | THR189 |
A | ILE191 |
A | ASN244 |
A | PRO245 |
A | SO41297 |
A | HOH2241 |
site_id | BC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 1292 |
Chain | Residue |
A | PHE145 |
A | ALA175 |
A | HOH2150 |
A | HOH2178 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 1293 |
Chain | Residue |
A | SER3 |
A | TYR4 |
A | GLU168 |
A | HOH2167 |
site_id | BC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO A 1294 |
Chain | Residue |
A | SER7 |
A | ALA45 |
A | ARG47 |
A | TYR48 |
A | GLN49 |
A | LEU126 |
A | HOH2135 |
site_id | BC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO A 1295 |
Chain | Residue |
A | TRP247 |
A | LEU249 |
A | GLU250 |
A | TRP276 |
A | HOH2218 |
A | HOH2219 |
A | PRO246 |
site_id | BC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO A 1296 |
Chain | Residue |
A | ARG95 |
A | LYS149 |
A | ALA150 |
A | LYS151 |
A | LEU152 |
A | PRO153 |
A | HOH2113 |
site_id | BC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 A 1297 |
Chain | Residue |
A | LEU29 |
A | LYS32 |
A | ARG158 |
A | EDO1291 |
A | HOH2037 |
A | HOH2162 |
A | HOH2241 |
site_id | BC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 1298 |
Chain | Residue |
A | ARG47 |
A | HIS87 |
A | PHE88 |
A | HOH2101 |
A | HOH2117 |
A | HOH2243 |
B | HIS87 |
B | ARG105 |
site_id | CC1 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE SAM B 1281 |
Chain | Residue |
B | LYS18 |
B | HIS19 |
B | THR41 |
B | HIS42 |
B | ALA43 |
B | GLY44 |
B | GLY99 |
B | SER100 |
B | GLU118 |
B | LEU119 |
B | HIS120 |
B | ALA142 |
B | ASP143 |
B | GLY144 |
B | ASP164 |
B | HOH2016 |
B | HOH2038 |
B | HOH2039 |
B | HOH2094 |
site_id | CC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG B 1282 |
Chain | Residue |
B | MET169 |
B | THR171 |
B | ASP172 |
B | EDO1286 |
site_id | CC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO B 1283 |
Chain | Residue |
B | ARG201 |
B | ILE208 |
B | GLN221 |
B | EDO1296 |
B | HOH2139 |
B | HOH2188 |
B | HOH2189 |
site_id | CC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO B 1284 |
Chain | Residue |
B | PRO228 |
B | ASP229 |
B | GLY270 |
B | HIS271 |
B | HOH2140 |
B | HOH2190 |
site_id | CC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO B 1285 |
Chain | Residue |
B | ALA66 |
B | TRP69 |
B | EDO1289 |
B | HOH2132 |
B | HOH2191 |
site_id | CC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO B 1286 |
Chain | Residue |
B | PHE145 |
B | PRO165 |
B | PRO166 |
B | ASP172 |
B | PEG1282 |
B | HOH2037 |
site_id | CC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO B 1287 |
Chain | Residue |
B | THR214 |
B | GLY215 |
B | ILE216 |
B | HOH2060 |
B | HOH2147 |
site_id | CC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE EDO B 1288 |
site_id | CC9 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE EDO B 1289 |
Chain | Residue |
B | TYR61 |
B | LEU62 |
B | ALA66 |
B | LEU94 |
B | PRO153 |
B | ARG186 |
B | EDO1285 |
B | HOH2049 |
B | HOH2051 |
site_id | DC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO B 1290 |
Chain | Residue |
B | TRP247 |
B | GLU250 |
B | TRP276 |
B | HOH2164 |
site_id | DC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO B 1291 |
Chain | Residue |
B | ALA76 |
B | GLU77 |
B | GLU79 |
B | ALA80 |
B | HOH2020 |
site_id | DC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO B 1292 |
Chain | Residue |
B | HIS261 |
B | SER262 |
B | VAL265 |
B | GLY268 |
B | HOH2179 |
B | HOH2193 |
site_id | DC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO B 1293 |
Chain | Residue |
B | PHE145 |
B | LYS149 |
B | SER178 |
B | GLY179 |
B | GLU182 |
B | HOH2122 |
B | HOH2194 |
site_id | DC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO B 1294 |
Chain | Residue |
B | ALA181 |
B | THR214 |
B | HOH2124 |
site_id | DC6 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE EDO B 1295 |
site_id | DC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO B 1296 |
Chain | Residue |
A | HOH2170 |
B | ILE208 |
B | GLU212 |
B | GLN221 |
B | EDO1283 |
B | HOH2188 |
B | HOH2189 |
Functional Information from PROSITE/UniProt
site_id | PS00092 |
Number of Residues | 7 |
Details | N6_MTASE N-6 Adenine-specific DNA methylases signature. ILIDPPY |
Chain | Residue | Details |
A | ILE161-TYR167 | |
A | ILE241-TRP247 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"23945937","evidenceCode":"ECO:0000305"}]} |
site_id | SWS_FT_FI2 |
Number of Residues | 12 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"23945937","evidenceCode":"ECO:0000305"}]} |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | Site: {"description":"Interaction with substrate rRNA","evidences":[{"evidenceCode":"ECO:0000305"}]} |