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4B11

Plasmodium vivax N-myristoyltransferase with a bound benzofuran inhibitor (compound 13)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
A0005737cellular_componentcytoplasm
A0006499biological_processN-terminal protein myristoylation
A0016746molecular_functionacyltransferase activity
A0018008biological_processN-terminal peptidyl-glycine N-myristoylation
A0046872molecular_functionmetal ion binding
B0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
B0005737cellular_componentcytoplasm
B0006499biological_processN-terminal protein myristoylation
B0016746molecular_functionacyltransferase activity
B0018008biological_processN-terminal peptidyl-glycine N-myristoylation
B0046872molecular_functionmetal ion binding
C0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
C0005737cellular_componentcytoplasm
C0006499biological_processN-terminal protein myristoylation
C0016746molecular_functionacyltransferase activity
C0018008biological_processN-terminal peptidyl-glycine N-myristoylation
C0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 7I1 A 999
ChainResidue
AVAL96
ATYR334
ALEU367
ALEU388
ALEU409
ALEU410
AHOH2519
AHOH2520
AHOH2521
AGLU97
AASP98
APHE103
APHE105
ATYR107
ATYR211
ATYR315
ASER319

site_idAC2
Number of Residues37
DetailsBINDING SITE FOR RESIDUE NHW A 1000
ChainResidue
ATYR28
ALYS29
APHE30
ATRP31
AASN94
ATYR95
AVAL96
AASN161
APHE162
ALEU163
ACYS164
AVAL165
AARG170
ASER171
ALYS172
AARG173
ALEU174
AALA175
APRO176
ATHR183
AASN187
ATRP192
AGLN193
ATHR197
ALEU202
ATYR393
AMG1413
AHOH2001
AHOH2003
AHOH2280
AHOH2288
AHOH2522
AHOH2523
AHOH2524
AHOH2525
AHOH2526
AHOH2527

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS A 1001
ChainResidue
ATHR146
AGLU159
ATRP289
AHOH2457

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 1411
ChainResidue
AARG210
ATYR212
ALYS373
BARG210
BLYS373

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 1412
ChainResidue
ALYS180
ATHR247
ALEU248
AARG358
AHOH2105

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1413
ChainResidue
ALEU169
ASER171
ALYS172
AARG173
ALEU174
ANHW1000

site_idAC7
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 7I1 B 999
ChainResidue
BVAL96
BGLU97
BASP98
BPHE103
BPHE105
BTYR107
BTHR197
BTYR211
BTYR315
BSER319
BTYR334
BLEU388
BLEU409
BLEU410
BHOH2441
BHOH2442
BHOH2443

site_idAC8
Number of Residues39
DetailsBINDING SITE FOR RESIDUE NHW B 1000
ChainResidue
BPHE162
BLEU163
BCYS164
BVAL165
BARG170
BSER171
BLYS172
BARG173
BLEU174
BALA175
BPRO176
BTHR183
BILE186
BTRP192
BGLN193
BALA194
BTHR197
BLEU202
BTYR393
BMG1412
BHOH2002
BHOH2003
BHOH2220
BHOH2226
BHOH2227
BHOH2444
BHOH2445
BHOH2446
BHOH2447
BHOH2448
BHOH2449
BTYR28
BLYS29
BPHE30
BTRP31
BASN94
BTYR95
BVAL96
BASN161

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS B 1001
ChainResidue
BGLU159
BPHE281
BTRP289
BHOH2386

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 1411
ChainResidue
BTYR65
BLYS180
BLEU248
BARG358

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1412
ChainResidue
BLEU169
BSER171
BLYS172
BARG173
BLEU174
BNHW1000

site_idBC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE 7I1 C 999
ChainResidue
CVAL96
CGLU97
CASP98
CPHE103
CPHE105
CTYR107
CTYR211
CTYR315
CSER319
CTYR334
CLEU410
CHOH2259
CHOH2431
CHOH2432

site_idBC4
Number of Residues38
DetailsBINDING SITE FOR RESIDUE NHW C 1000
ChainResidue
CTYR28
CLYS29
CPHE30
CTRP31
CASN94
CTYR95
CVAL96
CASN161
CPHE162
CLEU163
CCYS164
CVAL165
CARG170
CSER171
CLYS172
CARG173
CLEU174
CALA175
CPRO176
CTHR183
CILE186
CTRP192
CGLN193
CALA194
CTYR196
CTHR197
CLEU202
CTYR393
CMG1412
CHOH2004
CHOH2236
CHOH2244
CHOH2433
CHOH2434
CHOH2435
CHOH2436
CHOH2437
CHOH2438

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DMS C 1001
ChainResidue
CGLU159
CPHE281
CTRP289
CHOH2381

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL C 1411
ChainResidue
CLYS180
CTHR247
CLEU248
CARG358

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL C 1414
ChainResidue
CLEU255
CHOH2035

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 1412
ChainResidue
CLEU169
CSER171
CLYS172
CARG173
CLEU174
CNHW1000

Functional Information from PROSITE/UniProt
site_idPS00975
Number of Residues9
DetailsNMT_1 Myristoyl-CoA:protein N-myristoyltransferase signature 1. EVNFLCvHK
ChainResidueDetails
AGLU159-LYS167

site_idPS00976
Number of Residues7
DetailsNMT_2 Myristoyl-CoA:protein N-myristoyltransferase signature 2. KFGeGDG
ChainResidueDetails
ALYS380-GLY386

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PDB entries from 2024-10-30

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