4AM8
Crystal structure of the R54G mutant of putrescine transcarbamylase from Enterococcus faecalis bound to a curing guanidinium ion
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0006520 | biological_process | amino acid metabolic process |
A | 0006591 | biological_process | ornithine metabolic process |
A | 0006596 | biological_process | polyamine biosynthetic process |
A | 0016597 | molecular_function | amino acid binding |
A | 0016740 | molecular_function | transferase activity |
A | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
A | 0033388 | biological_process | putrescine biosynthetic process from arginine |
A | 0033390 | biological_process | putrescine biosynthetic process from arginine via N-carbamoylputrescine |
A | 0050231 | molecular_function | putrescine carbamoyltransferase activity |
B | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0006520 | biological_process | amino acid metabolic process |
B | 0006591 | biological_process | ornithine metabolic process |
B | 0006596 | biological_process | polyamine biosynthetic process |
B | 0016597 | molecular_function | amino acid binding |
B | 0016740 | molecular_function | transferase activity |
B | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
B | 0033388 | biological_process | putrescine biosynthetic process from arginine |
B | 0033390 | biological_process | putrescine biosynthetic process from arginine via N-carbamoylputrescine |
B | 0050231 | molecular_function | putrescine carbamoyltransferase activity |
C | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0006520 | biological_process | amino acid metabolic process |
C | 0006591 | biological_process | ornithine metabolic process |
C | 0006596 | biological_process | polyamine biosynthetic process |
C | 0016597 | molecular_function | amino acid binding |
C | 0016740 | molecular_function | transferase activity |
C | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
C | 0033388 | biological_process | putrescine biosynthetic process from arginine |
C | 0033390 | biological_process | putrescine biosynthetic process from arginine via N-carbamoylputrescine |
C | 0050231 | molecular_function | putrescine carbamoyltransferase activity |
D | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
D | 0005737 | cellular_component | cytoplasm |
D | 0006520 | biological_process | amino acid metabolic process |
D | 0006591 | biological_process | ornithine metabolic process |
D | 0006596 | biological_process | polyamine biosynthetic process |
D | 0016597 | molecular_function | amino acid binding |
D | 0016740 | molecular_function | transferase activity |
D | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
D | 0033388 | biological_process | putrescine biosynthetic process from arginine |
D | 0033390 | biological_process | putrescine biosynthetic process from arginine via N-carbamoylputrescine |
D | 0050231 | molecular_function | putrescine carbamoyltransferase activity |
E | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
E | 0005737 | cellular_component | cytoplasm |
E | 0006520 | biological_process | amino acid metabolic process |
E | 0006591 | biological_process | ornithine metabolic process |
E | 0006596 | biological_process | polyamine biosynthetic process |
E | 0016597 | molecular_function | amino acid binding |
E | 0016740 | molecular_function | transferase activity |
E | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
E | 0033388 | biological_process | putrescine biosynthetic process from arginine |
E | 0033390 | biological_process | putrescine biosynthetic process from arginine via N-carbamoylputrescine |
E | 0050231 | molecular_function | putrescine carbamoyltransferase activity |
F | 0004585 | molecular_function | ornithine carbamoyltransferase activity |
F | 0005737 | cellular_component | cytoplasm |
F | 0006520 | biological_process | amino acid metabolic process |
F | 0006591 | biological_process | ornithine metabolic process |
F | 0006596 | biological_process | polyamine biosynthetic process |
F | 0016597 | molecular_function | amino acid binding |
F | 0016740 | molecular_function | transferase activity |
F | 0016743 | molecular_function | carboxyl- or carbamoyltransferase activity |
F | 0033388 | biological_process | putrescine biosynthetic process from arginine |
F | 0033390 | biological_process | putrescine biosynthetic process from arginine via N-carbamoylputrescine |
F | 0050231 | molecular_function | putrescine carbamoyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE PAO A 1338 |
Chain | Residue |
A | SER52 |
A | LEU270 |
A | ARG297 |
A | GAI403 |
A | HOH524 |
A | HOH550 |
A | HOH626 |
A | HOH590 |
A | HOH509 |
A | HOH583 |
A | THR53 |
A | GLY54 |
A | THR55 |
A | ARG103 |
A | HIS130 |
A | THR163 |
A | GLN164 |
A | ASP227 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GAI A 1339 |
Chain | Residue |
A | GLN50 |
A | SER51 |
A | ARG103 |
A | MET125 |
A | PAO402 |
A | HOH509 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE TRS A 1340 |
Chain | Residue |
A | ASP161 |
A | ALA162 |
A | PHE188 |
A | HOH555 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NI A 1341 |
Chain | Residue |
A | HIS69 |
A | HOH563 |
C | HOH540 |
B | HIS69 |
B | HOH531 |
C | HIS69 |
site_id | AC5 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE PAO B 1340 |
Chain | Residue |
B | SER52 |
B | THR53 |
B | GLY54 |
B | THR55 |
B | ARG103 |
B | HIS130 |
B | THR163 |
B | GLN164 |
B | ASP227 |
B | LEU270 |
B | ARG297 |
B | GAI403 |
B | HOH598 |
B | HOH555 |
B | HOH553 |
B | HOH622 |
B | HOH605 |
B | HOH570 |
B | HOH518 |
site_id | AC6 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GAI B 1341 |
Chain | Residue |
B | GLN50 |
B | SER51 |
B | ARG103 |
B | MET125 |
B | TYR233 |
B | PAO402 |
B | HOH605 |
B | HOH518 |
site_id | AC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE TRS B 1342 |
Chain | Residue |
B | ASP161 |
B | ALA162 |
B | PHE188 |
B | GLY231 |
B | LEU232 |
B | HOH544 |
B | HOH504 |
B | HOH502 |
B | HOH558 |
site_id | AC8 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE PAO C 1338 |
Chain | Residue |
C | SER52 |
C | THR53 |
C | GLY54 |
C | THR55 |
C | ARG103 |
C | HIS130 |
C | GLN164 |
C | ASP227 |
C | LEU270 |
C | ARG297 |
C | GAI403 |
C | HOH606 |
C | HOH539 |
C | HOH619 |
C | HOH591 |
C | HOH615 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GAI C 1339 |
Chain | Residue |
C | GLN50 |
C | SER51 |
C | ARG103 |
C | MET125 |
C | TYR233 |
C | PAO402 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE TRS C 1340 |
Chain | Residue |
C | ASP161 |
C | ALA162 |
C | GLY231 |
C | HOH521 |
C | HOH575 |
site_id | BC2 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE PAO D 1350 |
Chain | Residue |
D | GLY54 |
D | THR55 |
D | ARG103 |
D | HIS130 |
D | THR163 |
D | GLN164 |
D | VAL165 |
D | ASP227 |
D | LEU270 |
D | ARG297 |
D | GAI402 |
D | HOH513 |
D | HOH640 |
D | HOH600 |
D | HOH561 |
D | HOH569 |
D | SER52 |
D | THR53 |
site_id | BC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GAI D 1351 |
Chain | Residue |
D | GLN50 |
D | SER51 |
D | ARG103 |
D | MET125 |
D | PAO401 |
D | HOH569 |
site_id | BC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NI D 1352 |
Chain | Residue |
D | HIS69 |
D | HOH510 |
F | HOH537 |
E | HIS69 |
E | HOH543 |
F | HIS69 |
site_id | BC5 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE PAO E 1338 |
Chain | Residue |
E | SER52 |
E | THR53 |
E | GLY54 |
E | THR55 |
E | ARG103 |
E | HIS130 |
E | GLN164 |
E | ASP227 |
E | LEU270 |
E | ARG297 |
E | GAI403 |
E | HOH563 |
E | HOH548 |
E | HOH541 |
E | HOH561 |
site_id | BC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GAI E 1339 |
Chain | Residue |
E | GLN50 |
E | SER51 |
E | ARG103 |
E | MET125 |
E | TYR233 |
E | PAO402 |
site_id | BC7 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE PAO F 1337 |
Chain | Residue |
F | SER52 |
F | THR53 |
F | GLY54 |
F | THR55 |
F | ARG103 |
F | HIS130 |
F | GLN164 |
F | VAL165 |
F | ASP227 |
F | LEU270 |
F | ARG297 |
D | GAI403 |
F | GAI403 |
F | HOH556 |
F | HOH583 |
F | HOH544 |
F | HOH577 |
F | HOH511 |
D | HOH555 |
site_id | BC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GAI F 1338 |
Chain | Residue |
D | GLU84 |
D | VAL92 |
F | GLY54 |
F | PRO271 |
F | PAO402 |
D | HOH614 |
D | HOH555 |
site_id | BC9 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GAI F 1339 |
Chain | Residue |
F | GLN50 |
F | SER51 |
F | ARG103 |
F | MET125 |
F | TYR233 |
F | PAO402 |
F | HOH577 |
F | HOH511 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE TRS F 1340 |
Chain | Residue |
F | ASP161 |
F | ALA162 |
F | PHE188 |
F | LEU232 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 24 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
A | SER52 | |
C | ARG103 | |
C | HIS130 | |
C | HIS268 | |
D | SER52 | |
D | ARG103 | |
D | HIS130 | |
D | HIS268 | |
E | SER52 | |
E | ARG103 | |
E | HIS130 | |
A | ARG103 | |
E | HIS268 | |
F | SER52 | |
F | ARG103 | |
F | HIS130 | |
F | HIS268 | |
A | HIS130 | |
A | HIS268 | |
B | SER52 | |
B | ARG103 | |
B | HIS130 | |
B | HIS268 | |
C | SER52 |
site_id | SWS_FT_FI2 |
Number of Residues | 12 |
Details | SITE: Important for structural integrity => ECO:0000250 |
Chain | Residue | Details |
A | LYS27 | |
E | GLU143 | |
F | LYS27 | |
F | GLU143 | |
A | GLU143 | |
B | LYS27 | |
B | GLU143 | |
C | LYS27 | |
C | GLU143 | |
D | LYS27 | |
D | GLU143 | |
E | LYS27 |