4AC9
CRYSTAL STRUCTURE OF TRANSLATION ELONGATION FACTOR SELB FROM METHANOCOCCUS MARIPALUDIS IN COMPLEX WITH GDP
Replaces: 1WB1Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0001514 | biological_process | selenocysteine incorporation |
| A | 0003723 | molecular_function | RNA binding |
| A | 0003746 | molecular_function | translation elongation factor activity |
| A | 0003924 | molecular_function | GTPase activity |
| A | 0005525 | molecular_function | GTP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006412 | biological_process | translation |
| A | 0006414 | biological_process | translational elongation |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0001514 | biological_process | selenocysteine incorporation |
| B | 0003723 | molecular_function | RNA binding |
| B | 0003746 | molecular_function | translation elongation factor activity |
| B | 0003924 | molecular_function | GTPase activity |
| B | 0005525 | molecular_function | GTP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006412 | biological_process | translation |
| B | 0006414 | biological_process | translational elongation |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0001514 | biological_process | selenocysteine incorporation |
| C | 0003723 | molecular_function | RNA binding |
| C | 0003746 | molecular_function | translation elongation factor activity |
| C | 0003924 | molecular_function | GTPase activity |
| C | 0005525 | molecular_function | GTP binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006412 | biological_process | translation |
| C | 0006414 | biological_process | translational elongation |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0001514 | biological_process | selenocysteine incorporation |
| D | 0003723 | molecular_function | RNA binding |
| D | 0003746 | molecular_function | translation elongation factor activity |
| D | 0003924 | molecular_function | GTPase activity |
| D | 0005525 | molecular_function | GTP binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006412 | biological_process | translation |
| D | 0006414 | biological_process | translational elongation |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE GDP A 1469 |
| Chain | Residue |
| A | HIS13 |
| A | ASP122 |
| A | SER155 |
| A | ALA156 |
| A | LYS157 |
| A | MG1470 |
| A | HOH2001 |
| A | HOH2002 |
| A | HOH2004 |
| A | ILE14 |
| A | ASP15 |
| A | HIS16 |
| A | GLY17 |
| A | LYS18 |
| A | THR19 |
| A | THR20 |
| A | LYS120 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG A 1470 |
| Chain | Residue |
| A | THR19 |
| A | GDP1469 |
| A | HOH2001 |
| A | HOH2002 |
| A | HOH2003 |
| A | HOH2004 |
| site_id | AC3 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE GDP B 1469 |
| Chain | Residue |
| B | HIS13 |
| B | ILE14 |
| B | ASP15 |
| B | HIS16 |
| B | GLY17 |
| B | LYS18 |
| B | THR19 |
| B | THR20 |
| B | LYS120 |
| B | ASP122 |
| B | ASN123 |
| B | SER155 |
| B | ALA156 |
| B | LYS157 |
| B | MG1470 |
| B | HOH2001 |
| B | HOH2002 |
| B | HOH2004 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG B 1470 |
| Chain | Residue |
| B | THR19 |
| B | GDP1469 |
| B | HOH2001 |
| B | HOH2002 |
| B | HOH2003 |
| B | HOH2004 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 1471 |
| Chain | Residue |
| B | ARG74 |
| B | ARG262 |
| C | ARG43 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 1472 |
| Chain | Residue |
| B | LYS197 |
| B | GLY198 |
| C | LYS55 |
| site_id | AC7 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE DXC B 1473 |
| Chain | Residue |
| B | ILE47 |
| B | ASP48 |
| B | ILE49 |
| B | GLY50 |
| B | PHE51 |
| B | GLN233 |
| C | ARG-2 |
| C | PRO195 |
| C | DXC1476 |
| site_id | AC8 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE 5GP B 1474 |
| Chain | Residue |
| A | ARG230 |
| A | SER238 |
| B | PRO96 |
| B | LYS97 |
| B | THR98 |
| B | MET104 |
| B | LEU105 |
| B | ILE139 |
| B | THR143 |
| B | ILE288 |
| B | LEU368 |
| site_id | AC9 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE GDP C 1469 |
| Chain | Residue |
| C | HIS13 |
| C | ILE14 |
| C | ASP15 |
| C | HIS16 |
| C | GLY17 |
| C | LYS18 |
| C | THR19 |
| C | THR20 |
| C | LYS120 |
| C | ASP122 |
| C | SER155 |
| C | ALA156 |
| C | LYS157 |
| C | MG1470 |
| C | HOH2001 |
| C | HOH2002 |
| C | HOH2003 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG C 1470 |
| Chain | Residue |
| C | THR19 |
| C | GDP1469 |
| C | HOH2001 |
| C | HOH2002 |
| C | HOH2003 |
| C | HOH2004 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 C 1471 |
| Chain | Residue |
| C | SER286 |
| C | ASP287 |
| C | ASP108 |
| C | HIS109 |
| C | LYS284 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 C 1472 |
| Chain | Residue |
| C | HIS144 |
| C | LYS147 |
| C | ASP287 |
| site_id | BC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 C 1473 |
| Chain | Residue |
| C | ARG465 |
| C | ARG466 |
| site_id | BC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 C 1474 |
| Chain | Residue |
| C | HIS13 |
| C | LYS97 |
| C | THR98 |
| C | GLN99 |
| site_id | BC6 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE DXC C 1475 |
| Chain | Residue |
| B | PRO195 |
| B | ILE196 |
| C | ILE47 |
| C | ASP48 |
| C | ILE49 |
| C | GLY50 |
| C | PHE51 |
| C | SER231 |
| C | GLN233 |
| site_id | BC7 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE DXC C 1476 |
| Chain | Residue |
| B | ILE196 |
| B | DXC1473 |
| C | ARG-2 |
| C | PRO-1 |
| C | HIS0 |
| C | MET1 |
| C | ALA199 |
| C | ARG230 |
| C | SER231 |
| site_id | BC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE DXC C 1477 |
| Chain | Residue |
| C | PRO96 |
| C | GLY101 |
| C | ARG131 |
| C | LYS290 |
| C | LEU368 |
| site_id | BC9 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE DXC C 1478 |
| Chain | Residue |
| C | SER121 |
| C | ASP122 |
| C | ALA124 |
| C | THR126 |
| C | THR158 |
| C | PHE160 |
| C | LEU392 |
| C | ARG393 |
| C | GLU394 |
| C | GLU427 |
| site_id | CC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE DXC C 1479 |
| Chain | Residue |
| C | GLU133 |
| C | GLU390 |
| C | SER425 |
| C | ASN462 |
| site_id | CC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE DXC C 1480 |
| Chain | Residue |
| C | ARG131 |
| C | SER138 |
| C | ASP287 |
| C | PHE289 |
| C | LYS290 |
| C | LYS290 |
| C | GLU331 |
