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4AB3

ATP-triggered molecular mechanics of the chaperonin GroEL

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000287molecular_functionmagnesium ion binding
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006457biological_processprotein folding
A0009314biological_processresponse to radiation
A0009408biological_processresponse to heat
A0016020cellular_componentmembrane
A0016853molecular_functionisomerase activity
A0016887molecular_functionATP hydrolysis activity
A0019068biological_processvirion assembly
A0042026biological_processprotein refolding
A0042802molecular_functionidentical protein binding
A0051082molecular_functionunfolded protein binding
A0140662molecular_functionATP-dependent protein folding chaperone
A1990220cellular_componentGroEL-GroES complex
B0000166molecular_functionnucleotide binding
B0000287molecular_functionmagnesium ion binding
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006457biological_processprotein folding
B0009314biological_processresponse to radiation
B0009408biological_processresponse to heat
B0016020cellular_componentmembrane
B0016853molecular_functionisomerase activity
B0016887molecular_functionATP hydrolysis activity
B0019068biological_processvirion assembly
B0042026biological_processprotein refolding
B0042802molecular_functionidentical protein binding
B0051082molecular_functionunfolded protein binding
B0140662molecular_functionATP-dependent protein folding chaperone
B1990220cellular_componentGroEL-GroES complex
C0000166molecular_functionnucleotide binding
C0000287molecular_functionmagnesium ion binding
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006457biological_processprotein folding
C0009314biological_processresponse to radiation
C0009408biological_processresponse to heat
C0016020cellular_componentmembrane
C0016853molecular_functionisomerase activity
C0016887molecular_functionATP hydrolysis activity
C0019068biological_processvirion assembly
C0042026biological_processprotein refolding
C0042802molecular_functionidentical protein binding
C0051082molecular_functionunfolded protein binding
C0140662molecular_functionATP-dependent protein folding chaperone
C1990220cellular_componentGroEL-GroES complex
D0000166molecular_functionnucleotide binding
D0000287molecular_functionmagnesium ion binding
D0005515molecular_functionprotein binding
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006457biological_processprotein folding
D0009314biological_processresponse to radiation
D0009408biological_processresponse to heat
D0016020cellular_componentmembrane
D0016853molecular_functionisomerase activity
D0016887molecular_functionATP hydrolysis activity
D0019068biological_processvirion assembly
D0042026biological_processprotein refolding
D0042802molecular_functionidentical protein binding
D0051082molecular_functionunfolded protein binding
D0140662molecular_functionATP-dependent protein folding chaperone
D1990220cellular_componentGroEL-GroES complex
E0000166molecular_functionnucleotide binding
E0000287molecular_functionmagnesium ion binding
E0005515molecular_functionprotein binding
E0005524molecular_functionATP binding
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0006457biological_processprotein folding
E0009314biological_processresponse to radiation
E0009408biological_processresponse to heat
E0016020cellular_componentmembrane
E0016853molecular_functionisomerase activity
E0016887molecular_functionATP hydrolysis activity
E0019068biological_processvirion assembly
E0042026biological_processprotein refolding
E0042802molecular_functionidentical protein binding
E0051082molecular_functionunfolded protein binding
E0140662molecular_functionATP-dependent protein folding chaperone
E1990220cellular_componentGroEL-GroES complex
F0000166molecular_functionnucleotide binding
F0000287molecular_functionmagnesium ion binding
F0005515molecular_functionprotein binding
F0005524molecular_functionATP binding
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0006457biological_processprotein folding
F0009314biological_processresponse to radiation
F0009408biological_processresponse to heat
F0016020cellular_componentmembrane
F0016853molecular_functionisomerase activity
F0016887molecular_functionATP hydrolysis activity
F0019068biological_processvirion assembly
F0042026biological_processprotein refolding
F0042802molecular_functionidentical protein binding
F0051082molecular_functionunfolded protein binding
F0140662molecular_functionATP-dependent protein folding chaperone
F1990220cellular_componentGroEL-GroES complex
G0000166molecular_functionnucleotide binding
G0000287molecular_functionmagnesium ion binding
G0005515molecular_functionprotein binding
G0005524molecular_functionATP binding
G0005737cellular_componentcytoplasm
G0005829cellular_componentcytosol
G0006457biological_processprotein folding
G0009314biological_processresponse to radiation
G0009408biological_processresponse to heat
G0016020cellular_componentmembrane
G0016853molecular_functionisomerase activity
G0016887molecular_functionATP hydrolysis activity
G0019068biological_processvirion assembly
G0042026biological_processprotein refolding
G0042802molecular_functionidentical protein binding
G0051082molecular_functionunfolded protein binding
G0140662molecular_functionATP-dependent protein folding chaperone
G1990220cellular_componentGroEL-GroES complex
H0000166molecular_functionnucleotide binding
H0000287molecular_functionmagnesium ion binding
H0005515molecular_functionprotein binding
H0005524molecular_functionATP binding
H0005737cellular_componentcytoplasm
H0005829cellular_componentcytosol
H0006457biological_processprotein folding
H0009314biological_processresponse to radiation
H0009408biological_processresponse to heat
H0016020cellular_componentmembrane
H0016853molecular_functionisomerase activity
H0016887molecular_functionATP hydrolysis activity
H0019068biological_processvirion assembly
H0042026biological_processprotein refolding
H0042802molecular_functionidentical protein binding
H0051082molecular_functionunfolded protein binding
H0140662molecular_functionATP-dependent protein folding chaperone
H1990220cellular_componentGroEL-GroES complex
I0000166molecular_functionnucleotide binding
I0000287molecular_functionmagnesium ion binding
I0005515molecular_functionprotein binding
I0005524molecular_functionATP binding
I0005737cellular_componentcytoplasm
I0005829cellular_componentcytosol
I0006457biological_processprotein folding
I0009314biological_processresponse to radiation
I0009408biological_processresponse to heat
I0016020cellular_componentmembrane
I0016853molecular_functionisomerase activity
I0016887molecular_functionATP hydrolysis activity
I0019068biological_processvirion assembly
I0042026biological_processprotein refolding
I0042802molecular_functionidentical protein binding
I0051082molecular_functionunfolded protein binding
I0140662molecular_functionATP-dependent protein folding chaperone
I1990220cellular_componentGroEL-GroES complex
J0000166molecular_functionnucleotide binding
J0000287molecular_functionmagnesium ion binding
J0005515molecular_functionprotein binding
J0005524molecular_functionATP binding
J0005737cellular_componentcytoplasm
J0005829cellular_componentcytosol
J0006457biological_processprotein folding
J0009314biological_processresponse to radiation
J0009408biological_processresponse to heat
J0016020cellular_componentmembrane
J0016853molecular_functionisomerase activity
J0016887molecular_functionATP hydrolysis activity
J0019068biological_processvirion assembly
J0042026biological_processprotein refolding
J0042802molecular_functionidentical protein binding
J0051082molecular_functionunfolded protein binding
J0140662molecular_functionATP-dependent protein folding chaperone
J1990220cellular_componentGroEL-GroES complex
K0000166molecular_functionnucleotide binding
K0000287molecular_functionmagnesium ion binding
K0005515molecular_functionprotein binding
K0005524molecular_functionATP binding
K0005737cellular_componentcytoplasm
K0005829cellular_componentcytosol
K0006457biological_processprotein folding
K0009314biological_processresponse to radiation
K0009408biological_processresponse to heat
K0016020cellular_componentmembrane
K0016853molecular_functionisomerase activity
K0016887molecular_functionATP hydrolysis activity
K0019068biological_processvirion assembly
K0042026biological_processprotein refolding
K0042802molecular_functionidentical protein binding
K0051082molecular_functionunfolded protein binding
K0140662molecular_functionATP-dependent protein folding chaperone
K1990220cellular_componentGroEL-GroES complex
L0000166molecular_functionnucleotide binding
L0000287molecular_functionmagnesium ion binding
L0005515molecular_functionprotein binding
L0005524molecular_functionATP binding
L0005737cellular_componentcytoplasm
L0005829cellular_componentcytosol
L0006457biological_processprotein folding
L0009314biological_processresponse to radiation
L0009408biological_processresponse to heat
L0016020cellular_componentmembrane
L0016853molecular_functionisomerase activity
L0016887molecular_functionATP hydrolysis activity
L0019068biological_processvirion assembly
L0042026biological_processprotein refolding
L0042802molecular_functionidentical protein binding
L0051082molecular_functionunfolded protein binding
L0140662molecular_functionATP-dependent protein folding chaperone
L1990220cellular_componentGroEL-GroES complex
M0000166molecular_functionnucleotide binding
M0000287molecular_functionmagnesium ion binding
M0005515molecular_functionprotein binding
M0005524molecular_functionATP binding
M0005737cellular_componentcytoplasm
M0005829cellular_componentcytosol
M0006457biological_processprotein folding
M0009314biological_processresponse to radiation
M0009408biological_processresponse to heat
M0016020cellular_componentmembrane
M0016853molecular_functionisomerase activity
M0016887molecular_functionATP hydrolysis activity
M0019068biological_processvirion assembly
M0042026biological_processprotein refolding
M0042802molecular_functionidentical protein binding
M0051082molecular_functionunfolded protein binding
M0140662molecular_functionATP-dependent protein folding chaperone
M1990220cellular_componentGroEL-GroES complex
N0000166molecular_functionnucleotide binding
N0000287molecular_functionmagnesium ion binding
N0005515molecular_functionprotein binding
N0005524molecular_functionATP binding
N0005737cellular_componentcytoplasm
N0005829cellular_componentcytosol
N0006457biological_processprotein folding
N0009314biological_processresponse to radiation
N0009408biological_processresponse to heat
N0016020cellular_componentmembrane
N0016853molecular_functionisomerase activity
N0016887molecular_functionATP hydrolysis activity
N0019068biological_processvirion assembly
N0042026biological_processprotein refolding
N0042802molecular_functionidentical protein binding
N0051082molecular_functionunfolded protein binding
N0140662molecular_functionATP-dependent protein folding chaperone
N1990220cellular_componentGroEL-GroES complex
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 1525
ChainResidue
ALYS51
AASP52
AATP1527

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1526
ChainResidue
AASP87
AGLY88
ASER151
AATP1527

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ATP A 1527
ChainResidue
AASP87
AGLY88
ATHR89
ATHR90
ATHR91
AILE150
AASN153
AGLY414
AGLY415
AILE454
AASP495
APO41525
AMG1526
ALEU31
AGLY53

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 B 1525
ChainResidue
BLYS51
BASP52
BATP1527

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 1526
ChainResidue
BASP87
BGLY88
BSER151
BATP1527

site_idAC6
Number of Residues16
DetailsBINDING SITE FOR RESIDUE ATP B 1527
ChainResidue
BLEU31
BGLY53
BASP87
BGLY88
BTHR89
BTHR90
BTHR91
BILE150
BSER151
BASN153
BGLY414
BGLY415
BILE454
BASP495
BPO41525
BMG1526

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 C 1525
ChainResidue
CLYS51
CASP52
CATP1527

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG C 1526
ChainResidue
CASP87
CGLY88
CSER151
CATP1527

site_idAC9
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ATP C 1527
ChainResidue
CLEU31
CGLY53
CASP87
CGLY88
CTHR89
CTHR90
CTHR91
CILE150
CASN153
CGLY414
CGLY415
CILE454
CASP495
CPO41525
CMG1526

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 D 1525
ChainResidue
DASP52
DATP1527

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG D 1526
ChainResidue
DASP87
DGLY88
DSER151
DATP1527

site_idBC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ATP D 1527
ChainResidue
DLEU31
DGLY53
DASP87
DGLY88
DTHR89
DTHR90
DTHR91
DILE150
DASN153
DGLY414
DGLY415
DILE454
DASP495
DPO41525
DMG1526

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 E 1525
ChainResidue
ELYS51
EASP52
EATP1527

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG E 1526
ChainResidue
EASP87
EGLY88
ESER151
EATP1527

site_idBC6
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ATP E 1527
ChainResidue
ETHR89
ETHR90
ETHR91
EILE150
EASN153
EGLY414
EGLY415
EILE454
EASP495
EPO41525
EMG1526
ELEU31
EGLY53
EASP87
EGLY88

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 F 1525
ChainResidue
FASP52
FATP1527

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG F 1526
ChainResidue
FASP87
FGLY88
FSER151
FATP1527

site_idBC9
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ATP F 1527
ChainResidue
FLEU31
FGLY53
FASP87
FGLY88
FTHR89
FTHR90
FTHR91
FILE150
FASN153
FGLY414
FGLY415
FILE454
FASP495
FPO41525
FMG1526

site_idCC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 G 1525
ChainResidue
GLYS51
GASP52
GATP1527

site_idCC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG G 1526
ChainResidue
GASP87
GGLY88
GSER151
GATP1527

site_idCC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ATP G 1527
ChainResidue
GLEU31
GGLY53
GASP87
GGLY88
GTHR89
GTHR90
GTHR91
GILE150
GASN153
GGLY414
GGLY415
GILE454
GASP495
GPO41525
GMG1526

site_idCC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 H 1525
ChainResidue
HASP52
HASN153
HMG1526
HATP1527

site_idCC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG H 1526
ChainResidue
HASP87
HGLY88
HPO41525
HATP1527

site_idCC6
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ATP H 1527
ChainResidue
HLEU31
HASP52
HGLY53
HASP87
HGLY88
HTHR89
HTHR90
HTHR91
HASN153
HGLY414
HGLY415
HILE454
HTYR478
HASN479
HALA480
HALA481
HILE493
HASP495
HPO41525
HMG1526

site_idCC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 I 1525
ChainResidue
IASP52
IASN153
IMG1526
IATP1527

site_idCC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG I 1526
ChainResidue
IASP87
IGLY88
IPO41525
IATP1527

site_idCC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ATP I 1527
ChainResidue
ILEU31
IASP52
IGLY53
IASP87
IGLY88
ITHR89
ITHR90
ITHR91
IASN153
IGLY414
IGLY415
IILE454
ITYR478
IASN479
IALA480
IALA481
IILE493
IASP495
IPO41525
IMG1526

site_idDC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 J 1525
ChainResidue
JASP52
JASN153
JMG1526
JATP1527

site_idDC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG J 1526
ChainResidue
JASP87
JGLY88
JPO41525
JATP1527

site_idDC3
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ATP J 1527
ChainResidue
JLEU31
JASP52
JGLY53
JASP87
JGLY88
JTHR89
JTHR90
JTHR91
JASN153
JGLY414
JGLY415
JILE454
JTYR478
JASN479
JALA480
JALA481
JILE493
JASP495
JPO41525
JMG1526

site_idDC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 K 1525
ChainResidue
KASP52
KASN153
KMG1526
KATP1527

site_idDC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG K 1526
ChainResidue
KASP87
KGLY88
KPO41525
KATP1527

site_idDC6
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ATP K 1527
ChainResidue
KLEU31
KASP52
KGLY53
KASP87
KGLY88
KTHR89
KTHR90
KTHR91
KASN153
KGLY414
KGLY415
KILE454
KTYR478
KASN479
KALA480
KALA481
KILE493
KASP495
KPO41525
KMG1526

site_idDC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 L 1525
ChainResidue
LASP52
LASN153
LMG1526
LATP1527

site_idDC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG L 1526
ChainResidue
LASP87
LGLY88
LPO41525
LATP1527

site_idDC9
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ATP L 1527
ChainResidue
LLEU31
LASP52
LGLY53
LASP87
LGLY88
LTHR89
LTHR90
LTHR91
LASN153
LGLY414
LGLY415
LILE454
LTYR478
LASN479
LALA480
LALA481
LILE493
LASP495
LPO41525
LMG1526

site_idEC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 M 1525
ChainResidue
MASP52
MASN153
MMG1526
MATP1527

site_idEC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG M 1526
ChainResidue
MASP87
MGLY88
MPO41525
MATP1527

site_idEC3
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ATP M 1527
ChainResidue
MLEU31
MASP52
MGLY53
MASP87
MGLY88
MTHR89
MTHR90
MTHR91
MASN153
MGLY414
MGLY415
MILE454
MTYR478
MASN479
MALA480
MALA481
MILE493
MASP495
MPO41525
MMG1526

site_idEC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 N 1525
ChainResidue
NASP52
NASN153
NMG1526
NATP1527

site_idEC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG N 1526
ChainResidue
NASP87
NGLY88
NPO41525
NATP1527

site_idEC6
Number of Residues20
DetailsBINDING SITE FOR RESIDUE ATP N 1527
ChainResidue
NLEU31
NASP52
NGLY53
NASP87
NGLY88
NTHR89
NTHR90
NTHR91
NASN153
NGLY414
NGLY415
NILE454
NTYR478
NASN479
NALA480
NALA481
NILE493
NASP495
NPO41525
NMG1526

Functional Information from PROSITE/UniProt
site_idPS00296
Number of Residues12
DetailsCHAPERONINS_CPN60 Chaperonins cpn60 signature. AAVEEGVVaGGG
ChainResidueDetails
AALA405-GLY416

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues154
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00600","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"25174333","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"14517228","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"9285585","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"1AON","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1PCQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1PF9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3WVL","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues14
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00600","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"25174333","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"14517228","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"9285585","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"1AON","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1PF9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3WVL","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues70
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"PubMed","id":"21151122","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues14
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"PubMed","id":"21151122","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

240971

PDB entries from 2025-08-27

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