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4A7W

Crystal structure of uridylate kinase from Helicobacter pylori

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0006225biological_processUDP biosynthetic process
A0009041molecular_functionUMP/dUMP kinase activity
A0016301molecular_functionkinase activity
A0033862molecular_functionUMP kinase activity
A0044210biological_process'de novo' CTP biosynthetic process
A0046940biological_processnucleoside monophosphate phosphorylation
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0006225biological_processUDP biosynthetic process
B0009041molecular_functionUMP/dUMP kinase activity
B0016301molecular_functionkinase activity
B0033862molecular_functionUMP kinase activity
B0044210biological_process'de novo' CTP biosynthetic process
B0046940biological_processnucleoside monophosphate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues25
DetailsBINDING SITE FOR RESIDUE GTP A 1241
ChainResidue
AARG102
ALYS120
AARG123
AARG123
AHIS124
ALYS127
AARG129
AHOH2064
AHOH2091
AHOH2094
AHOH2096
ALYS110
AHOH2101
AHOH2106
AHOH2162
AHOH2163
AHOH2164
AHOH2165
AGLU111
AILE112
ACYS113
AGLU114
AILE117
AARG119
ALYS120

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 1242
ChainResidue
ALYS13
ASER15
AGLY16
AGLU17
AGLY54
AGLY55
AGLY56
ATHR144
AHOH2044
AHOH2116

site_idAC3
Number of Residues24
DetailsBINDING SITE FOR RESIDUE GTP B 1241
ChainResidue
BARG102
BLYS110
BGLU111
BILE112
BCYS113
BGLU114
BILE117
BARG119
BLYS120
BLYS120
BARG123
BARG123
BHIS124
BLYS127
BARG129
BHOH2073
BHOH2075
BHOH2083
BHOH2084
BHOH2088
BHOH2148
BHOH2149
BHOH2150
BHOH2151

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 1242
ChainResidue
BLYS13
BSER15
BGLY16
BGLU17
BGLY54
BGLY55
BGLY56
BTHR144
BHOH2042

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues18
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01220
ChainResidueDetails
ALYS13
BLYS13
BGLY55
BGLY56
BARG60
BASP76
BTHR137
BTHR164
BTYR170
BASP173
AGLY55
AGLY56
AARG60
AASP76
ATHR137
ATHR164
ATYR170
AASP173

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PDB entries from 2024-07-24

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