4A59
Crystal structure of Toxoplasma gondii nucleoside triphosphate diphosphohydrolase 3 (NTPDase3) in complex with AMP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005576 | cellular_component | extracellular region |
| A | 0009134 | biological_process | nucleoside diphosphate catabolic process |
| A | 0016020 | cellular_component | membrane |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0017110 | molecular_function | nucleoside diphosphate phosphatase activity |
| A | 0017111 | molecular_function | ribonucleoside triphosphate phosphatase activity |
| A | 0020003 | cellular_component | symbiont-containing vacuole |
| B | 0005576 | cellular_component | extracellular region |
| B | 0009134 | biological_process | nucleoside diphosphate catabolic process |
| B | 0016020 | cellular_component | membrane |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0017110 | molecular_function | nucleoside diphosphate phosphatase activity |
| B | 0017111 | molecular_function | ribonucleoside triphosphate phosphatase activity |
| B | 0020003 | cellular_component | symbiont-containing vacuole |
| C | 0005576 | cellular_component | extracellular region |
| C | 0009134 | biological_process | nucleoside diphosphate catabolic process |
| C | 0016020 | cellular_component | membrane |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0017110 | molecular_function | nucleoside diphosphate phosphatase activity |
| C | 0017111 | molecular_function | ribonucleoside triphosphate phosphatase activity |
| C | 0020003 | cellular_component | symbiont-containing vacuole |
| D | 0005576 | cellular_component | extracellular region |
| D | 0009134 | biological_process | nucleoside diphosphate catabolic process |
| D | 0016020 | cellular_component | membrane |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0017110 | molecular_function | nucleoside diphosphate phosphatase activity |
| D | 0017111 | molecular_function | ribonucleoside triphosphate phosphatase activity |
| D | 0020003 | cellular_component | symbiont-containing vacuole |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE AMP A 700 |
| Chain | Residue |
| A | GLY280 |
| A | HOH2308 |
| A | HOH2309 |
| A | MET329 |
| A | GLY491 |
| A | GLY492 |
| A | GLY493 |
| A | ALA496 |
| A | LEU553 |
| A | HOH2123 |
| A | HOH2263 |
| site_id | AC2 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE AMP B 700 |
| Chain | Residue |
| B | VAL278 |
| B | GLY280 |
| B | MET329 |
| B | GLY491 |
| B | GLY492 |
| B | GLY493 |
| B | ALA496 |
| B | LEU553 |
| B | HOH2168 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AMP C 700 |
| Chain | Residue |
| C | GLY280 |
| C | MET329 |
| C | GLY492 |
| C | GLY493 |
| C | ALA496 |
| C | LEU553 |
| C | HOH2200 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AMP D 700 |
| Chain | Residue |
| D | VAL278 |
| D | GLY280 |
| D | MET329 |
| D | GLY492 |
| D | GLY493 |
| D | ALA496 |
| D | LEU553 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE AMP D 701 |
| Chain | Residue |
| C | SER297 |
| D | HIS195 |
| D | ARG199 |
| D | THR394 |
| D | ASN399 |
| D | ASN400 |
| D | GLU402 |
Functional Information from PROSITE/UniProt
| site_id | PS01238 |
| Number of Residues | 16 |
| Details | GDA1_CD39_NTPASE GDA1/CD39 family of nucleoside phosphatases signature. ItGaeEGlFaFITlNH |
| Chain | Residue | Details |
| A | ILE231-HIS246 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
