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3ZX2

NTPDase1 in complex with Decavanadate

Functional Information from GO Data
ChainGOidnamespacecontents
A0016787molecular_functionhydrolase activity
B0016787molecular_functionhydrolase activity
C0016787molecular_functionhydrolase activity
D0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 501
ChainResidue
AGLY214
AGLY215
ASER216
ASER217
AHOH2032

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 502
ChainResidue
ASER57
AGLY215
AGLN259

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 503
ChainResidue
ASER57
ASER92
AHOH2004
AGLY56

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 505
ChainResidue
ATYR402
APRO403
ATHR404
DHOH2203

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 506
ChainResidue
AGLU230
AGLN341
BLYS302

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACY A 511
ChainResidue
AMET366
APHE369
AMET383
ATHR387
AGLY417
ALEU421

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DVT A 531
ChainResidue
ALYS87
ALYS406
AGLU407
ALYS408
DLYS406
DGLU407
DLYS408

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 501
ChainResidue
BGLY214
BGLY215
BSER216
BSER217
BHOH2037

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 502
ChainResidue
BSER57
BGLY215
BGLN259

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL B 503
ChainResidue
BGLY56
BSER57
BSER92
BGLY133
BHOH2006

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 505
ChainResidue
BTYR402
BPRO403
BTHR404

site_idBC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 506
ChainResidue
BGLU396

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACY B 511
ChainResidue
BPHE332
BASN334
BSER422
BGLN426
BGLY427

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACY B 512
ChainResidue
BMET366
BPHE369
BMET383
BTHR387
BGLY417

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA B 521
ChainResidue
BCYS342
BALA343
BGLN426
BGLY427
BASN429

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DVT B 531
ChainResidue
BLYS406
BGLU407
BLYS408
CLYS406
CGLU407
CLYS408

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL C 501
ChainResidue
CGLY214
CGLY215
CSER216
CSER217
CHOH2007
CHOH2033

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL C 502
ChainResidue
CSER57
CGLY215
CASP258
CGLN259

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL C 503
ChainResidue
CGLY56
CSER57
CGLY90
CILE91
CSER92
CHOH2004

site_idCC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL C 505
ChainResidue
CTYR402
CTHR404

site_idCC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL C 506
ChainResidue
CALA231
CPRO232
CGLU233
CHOH2088
DHOH2049

site_idCC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACY C 511
ChainResidue
CGLY427
CLEU329
CPHE332
CASN334
CPHE344
CSER422
CGLN426

site_idCC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACY C 512
ChainResidue
CMET366
CPHE369
CMET383
CTHR387
CGLY417

site_idCC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA C 521
ChainResidue
CLEU329
CPHE332
CHOH2128
CHOH2129
CHOH2130

site_idCC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA C 522
ChainResidue
CCYS342
CALA343
CGLN426
CGLY427
CASN429
CHOH2147

site_idCC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL D 501
ChainResidue
DGLY214
DGLY215
DSER216
DHOH2086

site_idCC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL D 502
ChainResidue
DSER57
DGLY215
DGLN259

site_idDC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL D 503
ChainResidue
DGLY56
DSER57
DILE91
DSER92
DHOH2010

site_idDC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL D 505
ChainResidue
DTYR402
DPRO403
DTHR404

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL D 506
ChainResidue
DARG135
DARG138
DHOH2091
DHOH2117

site_idDC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL D 507
ChainResidue
CHOH2020
DALA231
DPRO232
DGLU233

site_idDC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL D 508
ChainResidue
DGLY285
DGLU396

site_idDC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL D 509
ChainResidue
DGLY354
DGLY354
DGLN437

site_idDC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACY D 511
ChainResidue
DLEU329
DPHE332
DASN334
DPHE344
DSER422
DGLN426
DGLY427

site_idDC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACY D 512
ChainResidue
DMET366
DPHE369
DMET383
DTHR387
DGLY417
DILE420

site_idDC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA D 521
ChainResidue
DCYS342
DALA343
DGLN426
DGLY427
DASN429
DHOH2192

site_idEC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA D 522
ChainResidue
DLEU329
DPHE332
DHOH2177
DHOH2178
DHOH2179
DHOH2180

site_idEC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA D 523
ChainResidue
DHOH2006
DHOH2007
DHOH2124
DHOH2133

site_idEC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DVT D 531
ChainResidue
ALYS406
AGLU407
ALYS408
DLYS87
DLYS406
DGLU407
DLYS408

Functional Information from PROSITE/UniProt
site_idPS01238
Number of Residues16
DetailsGDA1_CD39_NTPASE GDA1/CD39 family of nucleoside phosphatases signature. ItGqeEGaYgWITiNY
ChainResidueDetails
AILE169-TYR184

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"UniProtKB","id":"O35795","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues23
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246333

PDB entries from 2025-12-17

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