3ZOI

ISOPENICILLIN N SYNTHASE WITH AC-O-METHYL-D-THREONINE

Replaces:  2Y86

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005506	molecular_function	iron ion binding
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0009058	biological_process	biosynthetic process
A	0016216	molecular_function	isopenicillin-N synthase activity
A	0016491	molecular_function	oxidoreductase activity
A	0017000	biological_process	antibiotic biosynthetic process
A	0031418	molecular_function	L-ascorbic acid binding
A	0042318	biological_process	penicillin biosynthetic process
A	0044283	biological_process	small molecule biosynthetic process
A	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	22
Details	BINDING SITE FOR RESIDUE M2W A 1332

Chain	Residue
A	ARG87
A	LEU231
A	SER281
A	PRO283
A	PHE285
A	LEU324
A	FE1333
A	HOH2173
A	HOH2182
A	HOH2210
A	HOH2229
A	TYR91
A	HOH2230
A	HOH2231
A	HOH2232
A	SER183
A	ILE187
A	TYR189
A	PHE211
A	HIS214
A	ASP216
A	LEU223

---

site_id	AC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE FE A 1333

Chain	Residue
A	HIS214
A	ASP216
A	HIS270
A	M2W1332
A	HOH2173
A	HOH2178

---

site_id	AC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE SO4 A 1334

Chain	Residue
A	ARG53
A	ASP140
A	PHE141
A	GLN144
A	HOH2127
A	HOH2130
A	HOH2132
A	HOH2135
A	HOH2233

---

site_id	AC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 A 1335

Chain	Residue
A	ARG116
A	THR121
A	PRO122
A	LYS273
A	HOH2111
A	HOH2212

---

site_id	AC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE SO4 A 2234

Chain	Residue
A	ASN46
A	HIS47
A	GLY48
A	HOH2037

---

site_id	AC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 2235

Chain	Residue
A	ALA24
A	ARG27
A	LYS80
A	HOH2015

---

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE SO4 A 2236

Chain	Residue
A	ARG188
A	HOH2064
A	HOH2065

---

Functional Information from PROSITE/UniProt

site_id	PS00185
Number of Residues	10
Details	IPNS_1 Isopenicillin N synthase signature 1. KkAveSfCYL

Chain	Residue	Details
A	LYS97-LEU106

---

site_id	PS00186
Number of Residues	14
Details	IPNS_2 Isopenicillin N synthase signature 2. LInCGSymAhlTnN

Chain	Residue	Details
A	LEU250-ASN263

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	112
Details	Domain: {"description":"Fe2OG dioxygenase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00805","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	5
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10537113","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28703303","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9194566","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1BK0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QJE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2BJS","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10537113","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28703303","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9194566","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1QJE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2BJS","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10537113","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9194566","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1QJE","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00805","evidenceCode":"ECO:0000255"},{"source":"PDB","id":"1BK0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1BLZ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1HB1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1HB2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1HB3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1HB4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1OBN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1OC1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1ODM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1ODN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QIQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QJE","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QJF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1UZW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1W03","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1W04","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1W05","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1W06","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1W3V","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1W3X","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2BU9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2IVI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2IVJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JB4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VAU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VBB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VBD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VBP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VCM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2VE1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WO7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y60","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2Y6F","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ZKU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ZOI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4BB3","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00805","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	1
Details	Site: {"description":"Transition state stabilizer","evidences":[{"source":"PDB","id":"1QJE","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

Catalytic Information from CSA

site_id	MCSA1
Number of Residues	4
Details	M-CSA 145

Chain	Residue	Details
A	PHE211	polar/non-polar interaction, steric role
A	HIS214	metal ligand
A	ASP216	metal ligand
A	HIS270	metal ligand

---