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3ZLB

Crystal structure of phosphoglycerate kinase from Streptococcus pneumoniae

Functional Information from GO Data
ChainGOidnamespacecontents
A0002020molecular_functionprotease binding
A0004618molecular_functionphosphoglycerate kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006096biological_processglycolytic process
A0009274cellular_componentpeptidoglycan-based cell wall
A0009986cellular_componentcell surface
A0010756biological_processpositive regulation of plasminogen activation
A0016301molecular_functionkinase activity
A0043532molecular_functionangiostatin binding
A0051919biological_processpositive regulation of fibrinolysis
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1399
ChainResidue
AMET1
ALYS3
AASP8
ALYS398
AGOL1403

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1400
ChainResidue
AGLU288
AHOH2286
AHOH2307
AHOH2396

site_idAC3
Number of Residues28
DetailsBINDING SITE FOR RESIDUE ANP A 1401
ChainResidue
AGLY202
ASER203
ALYS208
AGLY226
AGLY227
AGLY296
AASN320
APRO322
AGLY324
AVAL325
AGLU327
AGLY354
AGLY355
AASP356
ASER357
AMG1407
AHOH2241
AHOH2243
AHOH2244
AHOH2249
AHOH2256
AHOH2271
AHOH2361
AHOH2362
AHOH2378
AHOH2397
AHOH2398
AHOH2399

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE GOL A 1402
ChainResidue
AALA83

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 1403
ChainResidue
AMET1
ATHR5
ALYS7
AASP8
ALYS398
AMG1399
AHOH2001

site_idAC6
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 1404
ChainResidue
AASP21
AALA151
APHE152
AGLY153
ALEU177
AGLU181
ATHR375
AGLY376
AHOH2042
AHOH2201

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 1405
ChainResidue
AASP88
AVAL89
AHOH2137
AHOH2400

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1406
ChainResidue
AHOH2388
AHOH2390
AHOH2401
AHOH2402
AHOH2403
AHOH2404

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 1407
ChainResidue
AANP1401
AHOH2361
AHOH2397

Functional Information from PROSITE/UniProt
site_idPS00111
Number of Residues11
DetailsPGLYCERATE_KINASE Phosphoglycerate kinase signature. KVLVRvDfNVP
ChainResidueDetails
ALYS15-PRO25

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues9
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00145
ChainResidueDetails
AASP21
AARG36
AHIS59
AARG119
AARG157
ALYS208
AGLY296
AGLU327
AGLY354

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PDB entries from 2024-07-17

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