3WL2
Monoclinic Lysozyme at 0.96 A resolution
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003796 | molecular_function | lysozyme activity |
A | 0005515 | molecular_function | protein binding |
A | 0005576 | cellular_component | extracellular region |
A | 0005615 | cellular_component | extracellular space |
A | 0005737 | cellular_component | cytoplasm |
A | 0005783 | cellular_component | endoplasmic reticulum |
A | 0016231 | molecular_function | beta-N-acetylglucosaminidase activity |
A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
A | 0016998 | biological_process | cell wall macromolecule catabolic process |
A | 0031640 | biological_process | killing of cells of another organism |
A | 0042742 | biological_process | defense response to bacterium |
A | 0042802 | molecular_function | identical protein binding |
A | 0050829 | biological_process | defense response to Gram-negative bacterium |
A | 0050830 | biological_process | defense response to Gram-positive bacterium |
A | 0051672 | biological_process | obsolete catabolism by organism of cell wall peptidoglycan in other organism |
B | 0003796 | molecular_function | lysozyme activity |
B | 0005515 | molecular_function | protein binding |
B | 0005576 | cellular_component | extracellular region |
B | 0005615 | cellular_component | extracellular space |
B | 0005737 | cellular_component | cytoplasm |
B | 0005783 | cellular_component | endoplasmic reticulum |
B | 0016231 | molecular_function | beta-N-acetylglucosaminidase activity |
B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
B | 0016998 | biological_process | cell wall macromolecule catabolic process |
B | 0031640 | biological_process | killing of cells of another organism |
B | 0042742 | biological_process | defense response to bacterium |
B | 0042802 | molecular_function | identical protein binding |
B | 0050829 | biological_process | defense response to Gram-negative bacterium |
B | 0050830 | biological_process | defense response to Gram-positive bacterium |
B | 0051672 | biological_process | obsolete catabolism by organism of cell wall peptidoglycan in other organism |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE NO3 A 201 |
Chain | Residue |
A | ASP66 |
A | PRO79 |
A | CYS80 |
A | SER81 |
A | HOH324 |
B | ARG21 |
B | GLY22 |
B | HOH391 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE NO3 A 202 |
Chain | Residue |
A | ASN74 |
A | ASN77 |
A | ILE78 |
A | PRO79 |
B | ARG112 |
B | LYS116 |
A | ASN65 |
site_id | AC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE NO3 A 203 |
Chain | Residue |
A | GLY126 |
A | ARG128 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NO3 A 204 |
Chain | Residue |
A | PHE3 |
A | ARG14 |
A | HIS15 |
A | ASP87 |
A | ILE88 |
A | HOH413 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NO3 A 205 |
Chain | Residue |
A | ARG5 |
A | LYS33 |
A | PHE38 |
A | TRP123 |
A | HOH357 |
site_id | AC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NO3 A 206 |
Chain | Residue |
A | SER24 |
A | LEU25 |
A | GLY26 |
A | GLN121 |
A | ILE124 |
site_id | AC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE NO3 A 207 |
Chain | Residue |
A | LYS116 |
A | HOH432 |
B | ASN65 |
B | ASN74 |
B | ASN77 |
B | ILE78 |
B | PRO79 |
B | HOH448 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE NO3 A 208 |
Chain | Residue |
A | TYR20 |
A | ARG21 |
A | ALA110 |
A | ASN113 |
A | ARG114 |
A | HOH321 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE NA A 209 |
Chain | Residue |
A | ARG21 |
A | HOH401 |
A | HOH448 |
site_id | BC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO A 210 |
Chain | Residue |
A | GLN57 |
A | ASN59 |
A | TRP63 |
A | ALA107 |
A | TRP108 |
A | HOH407 |
A | HOH449 |
site_id | BC2 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE NO3 B 201 |
Chain | Residue |
B | HIS15 |
B | GLY16 |
B | TYR20 |
B | LYS96 |
B | ALA110 |
B | ASN113 |
B | ARG114 |
B | NA203 |
B | HOH352 |
B | HOH405 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE NO3 B 202 |
Chain | Residue |
B | TRP63 |
B | ALA107 |
B | HOH321 |
B | HOH453 |
B | HOH454 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE NA B 203 |
Chain | Residue |
B | PHE34 |
B | ARG114 |
B | NO3201 |
B | HOH482 |
Functional Information from PROSITE/UniProt
site_id | PS00128 |
Number of Residues | 19 |
Details | GLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC |
Chain | Residue | Details |
A | CYS76-CYS94 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: |
Chain | Residue | Details |
A | GLU35 | |
A | ASP52 | |
B | GLU35 | |
B | ASP52 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: |
Chain | Residue | Details |
A | ASP101 | |
B | ASP101 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 6 |
Details | M-CSA 203 |
Chain | Residue | Details |
A | GLU35 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
A | ASN46 | |
A | ASP48 | |
A | SER50 | |
A | ASP52 | covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction |
A | ASN59 |
site_id | MCSA2 |
Number of Residues | 6 |
Details | M-CSA 203 |
Chain | Residue | Details |
B | GLU35 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
B | ASN46 | |
B | ASP48 | |
B | SER50 | |
B | ASP52 | covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction |
B | ASN59 |