Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004310 | molecular_function | obsolete farnesyl-diphosphate farnesyltransferase activity |
A | 0008610 | biological_process | lipid biosynthetic process |
A | 0009058 | biological_process | biosynthetic process |
A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
A | 0045338 | biological_process | farnesyl diphosphate metabolic process |
A | 0051996 | molecular_function | squalene synthase [NAD(P)H] activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN A 401 |
Chain | Residue |
A | ASN215 |
A | ASP219 |
A | PS7404 |
A | HOH734 |
A | HOH735 |
A | HOH736 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MN A 402 |
Chain | Residue |
A | MN403 |
A | PS7404 |
A | HOH739 |
A | HOH740 |
A | ASP80 |
A | GLU83 |
A | ASP84 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MN A 403 |
Chain | Residue |
A | ASP80 |
A | ASP84 |
A | MN402 |
A | PS7404 |
A | HOH741 |
A | HOH742 |
site_id | AC4 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE PS7 A 404 |
Chain | Residue |
A | SER51 |
A | PHE54 |
A | ALA73 |
A | LEU76 |
A | ARG77 |
A | ASP80 |
A | ASP84 |
A | MET154 |
A | VAL175 |
A | GLY180 |
A | MET207 |
A | LEU211 |
A | GLN212 |
A | ASN215 |
A | TYR276 |
A | PHE288 |
A | MN401 |
A | MN402 |
A | MN403 |
A | HOH736 |
A | HOH738 |
A | HOH740 |
A | HOH741 |
A | HOH742 |
A | HOH785 |
Functional Information from PROSITE/UniProt
site_id | PS01044 |
Number of Residues | 16 |
Details | SQUALEN_PHYTOEN_SYN_1 Squalene and phytoene synthases signature 1. YChyVAGLVGigLsrL |
Chain | Residue | Details |
A | TYR171-LEU186 | |
site_id | PS01045 |
Number of Residues | 26 |
Details | SQUALEN_PHYTOEN_SYN_2 Squalene and phytoene synthases signature 2. MGlflQkt.NIiRDYleDqqgg...ReFwP |
Chain | Residue | Details |
A | MET207-PRO232 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 20 |
Details | TRANSMEM: Helical => ECO:0000255 |
Chain | Residue | Details |
A | SER284-TYR304 | |
Chain | Residue | Details |
A | ARG52 | |
A | ARG77 | |
A | ARG218 | |
A | LYS315 | |
A | ARG317 | |
Chain | Residue | Details |
A | ASP80 | |
A | GLU83 | |
A | ASP84 | |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 4 |
Details | M-CSA 264 |
Chain | Residue | Details |
A | TYR171 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
A | ARG218 | electrostatic stabiliser, hydrogen bond donor, promote heterolysis |
A | ARG228 | electrostatic stabiliser, hydrogen bond donor, promote heterolysis |
A | PHE288 | polar/non-polar interaction, steric role, van der waals interaction |