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3W6P

Crystal structure of human Dlp1 in complex with GDP.AlF4

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues26
DetailsBINDING SITE FOR RESIDUE GDP A 801
ChainResidue
ASER35
ALYS216
AASP218
ALEU219
AVAL245
AASN246
AARG247
ASER248
AGLN249
AILE252
AALF802
ASER36
AMG803
ANA804
AHOH901
AHOH1101
AHOH1102
BASP221
BHOH909
AGLY37
ALYS38
ASER39
ASER40
AARG53
AGLY54
ATHR55

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ALF A 802
ChainResidue
AGLN34
ASER35
ALYS38
AGLY56
AVAL58
ATHR59
AGLY149
AGDP801
AMG803
ANA804
AHOH1102
AHOH1103

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 803
ChainResidue
ASER39
ATHR59
AGDP801
AALF802
AHOH1101
AHOH1102

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 804
ChainResidue
ASER35
AGLY54
AGLY56
AGDP801
AALF802

site_idAC5
Number of Residues26
DetailsBINDING SITE FOR RESIDUE GDP B 801
ChainResidue
AASP221
AHOH1193
BSER35
BSER36
BGLY37
BLYS38
BSER39
BSER40
BARG53
BGLY54
BTHR55
BLYS216
BASP218
BLEU219
BVAL245
BASN246
BARG247
BSER248
BGLN249
BILE252
BALF802
BMG803
BNA804
BHOH946
BHOH1134
BHOH1136

site_idAC6
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ALF B 802
ChainResidue
BGLN34
BSER35
BLYS38
BGLY56
BVAL58
BTHR59
BGLY149
BGDP801
BMG803
BNA804
BHOH1135
BHOH1136

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 803
ChainResidue
BSER39
BTHR59
BGDP801
BALF802
BHOH1134
BHOH1136

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA B 804
ChainResidue
BSER35
BGLY54
BGLY56
BGDP801
BALF802

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CA B 805
ChainResidue
BHOH1051
BHOH1126
BHOH1127
BHOH1131
BHOH1167
BHOH1223
BHOH1224
BHOH1015

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PG4 B 806
ChainResidue
AMET220
BMET220
BHOH916

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PG4 B 807
ChainResidue
APRO205
AASP206
BARG172
BASN176
BHOH937

Functional Information from PROSITE/UniProt
site_idPS00410
Number of Residues10
DetailsG_DYNAMIN_1 Dynamin-type guanine nucleotide-binding (G) domain signature. LPRGTGIVTR
ChainResidueDetails
ALEU51-ARG60

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000305|PubMed:23977156
ChainResidueDetails
AGLY32
ATHR215
AASN246
BGLY32
BTHR215
BASN246

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895
ChainResidueDetails
AMET1
BMET1

222624

PDB entries from 2024-07-17

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