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3W3S

Crystal structure of A. aeolicus tRNASec in complex with M. kandleri SerRS

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004828molecular_functionserine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006412biological_processtranslation
A0006418biological_processtRNA aminoacylation for protein translation
A0006434biological_processseryl-tRNA aminoacylation
A0008270molecular_functionzinc ion binding
A0016260biological_processselenocysteine biosynthetic process
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 2001
ChainResidue
ACYS319
AGLU368
ACYS478
ASSA2002

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE SSA A 2002
ChainResidue
AARG366
AGLU368
APHE409
ASER449
AVAL450
AGLY451
ASER452
AASN454
ACYS478
AGLY482
AARG485
AZN2001
AALA317
AARG349
AGLU351
AVAL361
APHE364

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PT A 2003
ChainResidue
APHE364
AARG485

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PT A 2004
ChainResidue
ATYR410

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PT A 2006
ChainResidue
BU47

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PT A 2007
ChainResidue
AHIS74

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PT A 2009
ChainResidue
AARG260
AHIS263
ALEU416

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PT A 2010
ChainResidue
AGLU105
AGLU131
AARG136

site_idAC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PT A 2012
ChainResidue
AGLY194

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PT A 2013
ChainResidue
AARG166
ASER167
AARG414

site_idBC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PT A 2015
ChainResidue
AGLU144

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PT A 2017
ChainResidue
AGLU511
ALYS512

site_idBC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 2018
ChainResidue
AARG40
AARG83

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 2019
ChainResidue
AARG40
AGLY41
BA47
BG47

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 2020
ChainResidue
AMSE1
APHE110
AASP111
AARG112
AGLU164

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 2021
ChainResidue
AASN296
AGLU297

site_idBC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 2022
ChainResidue
AARG308
AASP309

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 2023
ChainResidue
AARG212
AARG308

site_idCC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SO4 B 101
ChainResidue
BG47

site_idCC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 102
ChainResidue
BC47
BC47
BC47

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01278
ChainResidueDetails
AALA317
ACYS319
AARG349
AARG360
AARG366
AGLU368
ACYS478
AARG485

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PDB entries from 2024-07-10

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