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3VXX

Crystal structure of methyl CpG binding domain of MBD4 in complex with the 5mCG/5mCG sequence

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ACT A 201
ChainResidue
AGLU120
AGLU120
APHE122
BDG1
BACT101
CDT14
CDT14

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACT A 202
ChainResidue
AASP94
AHOH331
BDC8
BHOH211
ALYS92
APHE93

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ACT A 203
ChainResidue
AVAL73
APRO74
AGLY76
ATRP77

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT A 204
ChainResidue
AGLN101
AASN118
AGLU120

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 205
ChainResidue
AGLN83
AARG84
ALEU85
AHOH319
CDC3
C5CM4

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 206
ChainResidue
APHE93
APHE130
ATHR131
AVAL132
BDA7

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 207
ChainResidue
ALEU133
APRO134

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT B 101
ChainResidue
AACT201
BDT2
BDC3
CDC13
CDT14

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT C 101
ChainResidue
BDC13
CDT2
CDC3

225946

PDB entries from 2024-10-09

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