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3VV7

Crystal Structure of beta secetase in complex with 2-amino-6-((1S,2R)-2-(3'-methoxybiphenyl-3-yl)cyclopropyl)-3-methylpyrimidin-4(3H)-one

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 501
ChainResidue
ASER105

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 502
ChainResidue
AARG349

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 503
ChainResidue
AHOH1001

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IOD A 504
ChainResidue
AGLY-3
ALEU56
AHIS181

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 505
ChainResidue
AARG96

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 506
ChainResidue
ALYS238

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 507
ChainResidue
ATYR51
AGLN53
ASER187
AHOH1120
AHOH1153
AHOH1188
AHOH1189
AARG50

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 508
ChainResidue
ALYS9
ASER10
AGLY11
AGLN12
AGLY13
ATYR14
AVAL170
ATHR232
AGLU339
AHOH1066

site_idAC9
Number of Residues11
DetailsBINDING SITE FOR RESIDUE 0B1 A 509
ChainResidue
AGLN12
AGLY13
AASP32
ATYR71
APHE108
AILE118
AASP228
AGLY230
ATHR231
AHOH1075
AHOH1177

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ILVDTGSSNFAV
ChainResidueDetails
AILE29-VAL40

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10094
ChainResidueDetails
AASP32
AASP228

site_idSWS_FT_FI2
Number of Residues7
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
ChainResidueDetails
ALYS65
ALYS214
ALYS218
ALYS224
ALYS238
ALYS239
ALYS246

site_idSWS_FT_FI3
Number of Residues4
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN92
AASN111
AASN162
AASN293

221051

PDB entries from 2024-06-12

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