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3VI7

Human hematopoietic prostaglandin D synthase inhibitor complex structures

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0001516biological_processprostaglandin biosynthetic process
A0004364molecular_functionglutathione transferase activity
A0004667molecular_functionprostaglandin-D synthase activity
A0005509molecular_functioncalcium ion binding
A0005515molecular_functionprotein binding
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006693biological_processprostaglandin metabolic process
A0007165biological_processsignal transduction
A0007626biological_processlocomotory behavior
A0009624biological_processresponse to nematode
A0010269biological_processresponse to selenium ion
A0016740molecular_functiontransferase activity
A0016853molecular_functionisomerase activity
A0042803molecular_functionprotein homodimerization activity
A0043231cellular_componentintracellular membrane-bounded organelle
A0046872molecular_functionmetal ion binding
A2000255biological_processnegative regulation of male germ cell proliferation
B0000287molecular_functionmagnesium ion binding
B0001516biological_processprostaglandin biosynthetic process
B0004364molecular_functionglutathione transferase activity
B0004667molecular_functionprostaglandin-D synthase activity
B0005509molecular_functioncalcium ion binding
B0005515molecular_functionprotein binding
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006693biological_processprostaglandin metabolic process
B0007165biological_processsignal transduction
B0007626biological_processlocomotory behavior
B0009624biological_processresponse to nematode
B0010269biological_processresponse to selenium ion
B0016740molecular_functiontransferase activity
B0016853molecular_functionisomerase activity
B0042803molecular_functionprotein homodimerization activity
B0043231cellular_componentintracellular membrane-bounded organelle
B0046872molecular_functionmetal ion binding
B2000255biological_processnegative regulation of male germ cell proliferation
C0000287molecular_functionmagnesium ion binding
C0001516biological_processprostaglandin biosynthetic process
C0004364molecular_functionglutathione transferase activity
C0004667molecular_functionprostaglandin-D synthase activity
C0005509molecular_functioncalcium ion binding
C0005515molecular_functionprotein binding
C0005654cellular_componentnucleoplasm
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006693biological_processprostaglandin metabolic process
C0007165biological_processsignal transduction
C0007626biological_processlocomotory behavior
C0009624biological_processresponse to nematode
C0010269biological_processresponse to selenium ion
C0016740molecular_functiontransferase activity
C0016853molecular_functionisomerase activity
C0042803molecular_functionprotein homodimerization activity
C0043231cellular_componentintracellular membrane-bounded organelle
C0046872molecular_functionmetal ion binding
C2000255biological_processnegative regulation of male germ cell proliferation
D0000287molecular_functionmagnesium ion binding
D0001516biological_processprostaglandin biosynthetic process
D0004364molecular_functionglutathione transferase activity
D0004667molecular_functionprostaglandin-D synthase activity
D0005509molecular_functioncalcium ion binding
D0005515molecular_functionprotein binding
D0005654cellular_componentnucleoplasm
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006693biological_processprostaglandin metabolic process
D0007165biological_processsignal transduction
D0007626biological_processlocomotory behavior
D0009624biological_processresponse to nematode
D0010269biological_processresponse to selenium ion
D0016740molecular_functiontransferase activity
D0016853molecular_functionisomerase activity
D0042803molecular_functionprotein homodimerization activity
D0043231cellular_componentintracellular membrane-bounded organelle
D0046872molecular_functionmetal ion binding
D2000255biological_processnegative regulation of male germ cell proliferation
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GSH A 200
ChainResidue
ATYR8
AHOH207
AHOH662
DASP697
AARG14
ATRP39
ALYS50
AILE51
APRO52
AGLN63
ASER64
ACBD201

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE CBD A 201
ChainResidue
AGLY13
AARG14
AMET99
ATRP104
AALA105
AGLU106
ALYS107
ATYR152
ACYS156
ALYS198
ALEU199
AGSH200
AHOH203
AHOH235
AHOH288
AHOH418
AHOH653

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GSH B 400
ChainResidue
BHOH71
BTYR208
BARG214
BTRP239
BLYS243
BLYS250
BILE251
BPRO252
BGLN263
BSER264
BCBD401
BHOH422
BHOH448
BHOH850
CASP497

site_idAC4
Number of Residues19
DetailsBINDING SITE FOR RESIDUE CBD B 401
ChainResidue
BHOH37
BPHE209
BGLY213
BARG214
BASP296
BMET299
BSER300
BTRP304
BALA305
BGLU306
BLYS312
BTYR352
BCYS356
BLYS398
BLEU399
BGSH400
BHOH415
BHOH679
BHOH868

site_idAC5
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GSH C 600
ChainResidue
BASP297
CHOH103
CHOH282
CHOH296
CHOH309
CTYR408
CARG414
CTRP439
CLYS443
CLYS450
CILE451
CPRO452
CGLN463
CSER464
CHOH758

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA C 902
ChainResidue
BHOH42
BHOH462
BHOH505
CHOH165
CHOH336
CASP496

site_idAC7
Number of Residues13
DetailsBINDING SITE FOR RESIDUE GSH D 800
ChainResidue
AASP97
DHOH156
DTYR608
DARG614
DTRP639
DLYS643
DGLY649
DLYS650
DILE651
DPRO652
DGLN663
DSER664
DHOH832

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA D 901
ChainResidue
DHOH255
DASP696
DHOH835
AHOH239
AHOH302

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues20
DetailsBINDING: BINDING => ECO:0000269|PubMed:12627223, ECO:0000269|PubMed:15113825, ECO:0000269|PubMed:16547010, ECO:0000269|PubMed:18341273, ECO:0000269|PubMed:19939518
ChainResidueDetails
ATYR8
BGLN263
CTYR408
CARG414
CTRP439
CGLY449
CGLN463
DTYR608
DARG614
DTRP639
DGLY649
AARG14
DGLN663
ATRP39
AGLY49
AGLN63
BTYR208
BARG214
BTRP239
BGLY249

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PDB entries from 2024-09-04

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