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3VAK

Structure of U2AF65 variant with BrU5 DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003723molecular_functionRNA binding
B0003676molecular_functionnucleic acid binding
B0003723molecular_functionRNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DIO A 401
ChainResidue
ATYR269
AASN271
AGLY297
ALEU298
ASER299

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DIO A 402
ChainResidue
APRO144
AALA148
AGLN233
ALEU325

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 403
ChainResidue
ALYS225
AARG227
AHOH613

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 404
ChainResidue
AGLN190
AILE191
AHOH585
PDU6

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 405
ChainResidue
AARG149
AARG150
AGLU201
ASER281
AHOH507
PDU7

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 406
ChainResidue
AARG228
AILE310

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 407
ChainResidue
AASN192
AASP194

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 409
ChainResidue
ALEU285
AHOH544
AHOH640

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DIO B 401
ChainResidue
BLYS276
BLEU285
BLYS286
BPHE288
BHOH589

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE DIO B 402
ChainResidue
BPRO182
BGLY183
BHIS259

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE DIO B 403
ChainResidue
BTYR269
BGLY297
BSER299
BHOH574

site_idBC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CPQ B 404
ChainResidue
BGLN274

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 405
ChainResidue
BARG149
BARG203
BSER204
BVAL205
BHOH547

site_idBC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 406
ChainResidue
AARG174
BARG227

site_idBC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 407
ChainResidue
BMET212
BARG228

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 408
ChainResidue
BALA181
BARG334
BHOH507

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues164
DetailsDomain: {"description":"RRM 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00176","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsModified residue: {"description":"5-hydroxylysine; by JMJD6","evidences":[{"source":"PubMed","id":"19574390","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

251422

PDB entries from 2026-04-01

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