3UXV
Crystal Structure of 7-cyano-7-deazaguanine reductase, QueF from Vibrio cholerae complexed with NADP and PreQ
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003674 | molecular_function | molecular_function |
A | 0005575 | cellular_component | cellular_component |
A | 0005737 | cellular_component | cytoplasm |
A | 0008150 | biological_process | biological_process |
A | 0008616 | biological_process | queuosine biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0033739 | molecular_function | preQ1 synthase activity |
A | 0046857 | molecular_function | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor |
B | 0003674 | molecular_function | molecular_function |
B | 0005575 | cellular_component | cellular_component |
B | 0005737 | cellular_component | cytoplasm |
B | 0008150 | biological_process | biological_process |
B | 0008616 | biological_process | queuosine biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0033739 | molecular_function | preQ1 synthase activity |
B | 0046857 | molecular_function | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor |
C | 0003674 | molecular_function | molecular_function |
C | 0005575 | cellular_component | cellular_component |
C | 0005737 | cellular_component | cytoplasm |
C | 0008150 | biological_process | biological_process |
C | 0008616 | biological_process | queuosine biosynthetic process |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0033739 | molecular_function | preQ1 synthase activity |
C | 0046857 | molecular_function | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor |
D | 0003674 | molecular_function | molecular_function |
D | 0005575 | cellular_component | cellular_component |
D | 0005737 | cellular_component | cytoplasm |
D | 0008150 | biological_process | biological_process |
D | 0008616 | biological_process | queuosine biosynthetic process |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0033739 | molecular_function | preQ1 synthase activity |
D | 0046857 | molecular_function | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE EDO A 302 |
Chain | Residue |
A | HIS188 |
A | SER204 |
A | MSE284 |
A | ALA285 |
A | ARG286 |
A | HOH311 |
A | HOH371 |
B | LEU139 |
site_id | AC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 303 |
Chain | Residue |
A | SER252 |
A | SER273 |
A | HIS274 |
C | SER112 |
C | ASP114 |
C | HOH337 |
A | GLN251 |
site_id | AC3 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE NAP B 301 |
Chain | Residue |
A | SER95 |
A | LYS96 |
A | LYS99 |
A | GLN199 |
A | ARG262 |
A | GLY263 |
B | SER95 |
B | LYS96 |
B | LYS99 |
B | ARG262 |
B | GLY263 |
B | GUN300 |
B | HOH325 |
B | HOH686 |
B | HOH719 |
site_id | AC4 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GUN B 300 |
Chain | Residue |
B | TRP62 |
B | LEU92 |
B | ILE93 |
B | GLU94 |
B | SER95 |
B | PHE232 |
B | HIS233 |
B | GLU234 |
B | ILE267 |
B | NAP301 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL B 302 |
Chain | Residue |
B | ALA126 |
B | CYS127 |
B | HOH326 |
B | HOH414 |
site_id | AC6 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE GUN C 300 |
Chain | Residue |
C | TRP62 |
C | LEU92 |
C | ILE93 |
C | GLU94 |
C | SER95 |
C | PHE232 |
C | HIS233 |
C | GLU234 |
C | ILE267 |
D | NAP301 |
site_id | AC7 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE NAP D 301 |
Chain | Residue |
C | SER95 |
C | LYS96 |
C | LYS99 |
C | ARG262 |
C | GLY263 |
C | LEU265 |
C | GUN300 |
D | SER95 |
D | LYS96 |
D | LYS99 |
D | ARG262 |
D | GLY263 |
D | HOH332 |
D | HOH717 |
D | HOH718 |
D | HOH824 |
site_id | AC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE EDO D 302 |
Chain | Residue |
C | LEU139 |
D | HIS188 |
D | SER204 |
D | MSE284 |
D | ALA285 |
D | ARG286 |
D | HOH293 |
D | HOH466 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL D 303 |
Chain | Residue |
B | SER112 |
B | TRP113 |
B | ASP114 |
D | GLN251 |
D | SER252 |
D | SER273 |
D | HIS274 |
site_id | BC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL D 304 |
Chain | Residue |
A | ASN91 |
A | HOH289 |
A | HOH369 |
D | PRO38 |
D | ASN91 |
D | HOH312 |
D | HOH393 |
D | HOH471 |
D | HOH607 |
site_id | BC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL D 305 |
Chain | Residue |
D | HOH395 |
D | HOH443 |
D | HOH582 |
D | GLU82 |
D | GLU145 |
D | ASN281 |
D | GLN282 |
D | HOH374 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Thioimide intermediate => ECO:0000255|HAMAP-Rule:MF_00817, ECO:0000269|Ref.3 |
Chain | Residue | Details |
B | ALA194 | |
C | ALA194 | |
D | ALA194 | |
A | ALA194 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | ACT_SITE: Proton donor => ECO:0000255|HAMAP-Rule:MF_00817 |
Chain | Residue | Details |
A | ASP201 | |
B | ASP201 | |
C | ASP201 | |
D | ASP201 |
site_id | SWS_FT_FI3 |
Number of Residues | 16 |
Details | BINDING: |
Chain | Residue | Details |
B | ILE93 | |
B | SER95 | |
B | HIS233 | |
B | ARG262 | |
C | ILE93 | |
C | SER95 | |
C | HIS233 | |
C | ARG262 | |
D | ILE93 | |
D | SER95 | |
D | HIS233 | |
D | ARG262 | |
A | ILE93 | |
A | SER95 | |
A | HIS233 | |
A | ARG262 |