Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3UMY

Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0003723molecular_functionRNA binding
A0003735molecular_functionstructural constituent of ribosome
A0005840cellular_componentribosome
A0006412biological_processtranslation
A0006417biological_processregulation of translation
A0015934cellular_componentlarge ribosomal subunit
A0019843molecular_functionrRNA binding
A1990904cellular_componentribonucleoprotein complex
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 301
ChainResidue
ASER211
AVAL212
AARG223
AILE224
AHOH441

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 302
ChainResidue
APHE147

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 303
ChainResidue
AARG52
AARG53
ASER54
AHOH440
APRO1
ALYS2
AHIS3

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NA A 304
ChainResidue
AGLU42
ATHR215
ATHR216
AALA217
BG2123
BC2175
BA2176

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2201
ChainResidue
BU2122
BG2123
BHOH2320
BHOH2323
BHOH2324
BHOH2328

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 2202
ChainResidue
BC2128
BC2129
BA2173
BC2174
BHOH2327

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 2203
ChainResidue
BG2155
BG2156
BG2157
BHOH2353
BHOH2357

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 2204
ChainResidue
BG2125
BHOH2371
BHOH2374
BHOH2375

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 2205
ChainResidue
ALYS184
BG2156
BHOH2381
BHOH2383

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 2206
ChainResidue
BC2178
BHOH2346
BHOH2393

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 2207
ChainResidue
BC2139
BC2140
BU2150
BG2151
BHOH2388

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 2208
ChainResidue
BG2133
BG2157

Functional Information from PROSITE/UniProt
site_idPS00430
Number of Residues46
DetailsTONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. pkhgkryrallekvdpnkiytideaahlvkelatakfd.............................................................................ETVEVHAK
ChainResidueDetails
APRO1-LYS46

site_idPS01199
Number of Residues20
DetailsRIBOSOMAL_L1 Ribosomal protein L1 signature. MgaVgskLGriLGPRGlLPN
ChainResidueDetails
AMET120-ASN139

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon