3UG3
Crystal structure of alpha-L-arabinofuranosidase from Thermotoga maritima ligand free form
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000272 | biological_process | polysaccharide catabolic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0046373 | biological_process | L-arabinose metabolic process |
| A | 0046556 | molecular_function | alpha-L-arabinofuranosidase activity |
| B | 0000272 | biological_process | polysaccharide catabolic process |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0046373 | biological_process | L-arabinose metabolic process |
| B | 0046556 | molecular_function | alpha-L-arabinofuranosidase activity |
| C | 0000272 | biological_process | polysaccharide catabolic process |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0046373 | biological_process | L-arabinose metabolic process |
| C | 0046556 | molecular_function | alpha-L-arabinofuranosidase activity |
| D | 0000272 | biological_process | polysaccharide catabolic process |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0046373 | biological_process | L-arabinose metabolic process |
| D | 0046556 | molecular_function | alpha-L-arabinofuranosidase activity |
| E | 0000272 | biological_process | polysaccharide catabolic process |
| E | 0016787 | molecular_function | hydrolase activity |
| E | 0046373 | biological_process | L-arabinose metabolic process |
| E | 0046556 | molecular_function | alpha-L-arabinofuranosidase activity |
| F | 0000272 | biological_process | polysaccharide catabolic process |
| F | 0016787 | molecular_function | hydrolase activity |
| F | 0046373 | biological_process | L-arabinose metabolic process |
| F | 0046556 | molecular_function | alpha-L-arabinofuranosidase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE TRS A 485 |
| Chain | Residue |
| A | ASN75 |
| B | HOH545 |
| A | ARG91 |
| A | PHE92 |
| A | HOH507 |
| A | HOH2108 |
| A | HOH2109 |
| B | ASP132 |
| B | HIS136 |
| B | HOH532 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO A 486 |
| Chain | Residue |
| A | TYR237 |
| A | GLU281 |
| A | TRP285 |
| A | GLN326 |
| A | HOH2102 |
| A | HOH2104 |
| A | HOH2382 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 487 |
| Chain | Residue |
| A | GLU172 |
| A | TRP177 |
| A | TYR237 |
| A | HOH924 |
| A | HOH2104 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 488 |
| Chain | Residue |
| A | HIS235 |
| A | PHE236 |
| A | TYR237 |
| A | PHE378 |
| A | HOH1248 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 489 |
| Chain | Residue |
| A | ARG189 |
| A | GLU193 |
| A | HOH630 |
| A | HOH2090 |
| C | GLY180 |
| C | HIS181 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 490 |
| Chain | Residue |
| A | LYS314 |
| A | VAL362 |
| A | LYS363 |
| A | THR364 |
| A | HOH1357 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO A 491 |
| Chain | Residue |
| A | VAL200 |
| C | PHE92 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO A 492 |
| Chain | Residue |
| A | TYR371 |
| A | HOH1425 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO A 494 |
| Chain | Residue |
| A | GLU255 |
| D | LYS261 |
| D | LYS262 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 495 |
| Chain | Residue |
| A | GLY180 |
| A | HIS181 |
| A | HOH1283 |
| B | ARG189 |
| B | GLU193 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE NA A 496 |
| Chain | Residue |
| A | HOH1577 |
| A | HOH2347 |
| A | HOH2348 |
| E | ASP464 |
| E | HOH1323 |
| site_id | BC3 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE TRS B 485 |
| Chain | Residue |
| B | ASN75 |
| B | ARG91 |
| B | PHE92 |
| B | HOH698 |
| B | HOH894 |
| B | HOH2155 |
| C | ASP132 |
| C | LEU135 |
| C | HIS136 |
| C | HOH510 |
| C | HOH2153 |
| site_id | BC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO B 486 |
| Chain | Residue |
| B | TRP96 |
| B | TYR237 |
| B | GLU281 |
| B | GLN326 |
| B | LEU331 |
| B | HOH731 |
| B | HOH2165 |
| B | HOH2167 |
| site_id | BC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO B 487 |
| Chain | Residue |
| B | GLU172 |
| B | TRP177 |
| B | TYR237 |
| B | HOH731 |
| B | HOH1023 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO B 488 |
| Chain | Residue |
| B | HIS235 |
| B | TYR237 |
| B | PHE378 |
| B | HOH1364 |
| site_id | BC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO B 489 |
| Chain | Residue |
| B | LYS314 |
| B | LEU361 |
| B | VAL362 |
| B | LYS363 |
| B | THR364 |
| B | HOH1367 |
| site_id | BC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO B 490 |
| Chain | Residue |
| B | ASN142 |
| B | LYS144 |
| B | PHE201 |
| B | HOH2175 |
| site_id | BC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO B 492 |
| Chain | Residue |
| B | VAL200 |
| B | HOH1003 |
| site_id | CC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO B 493 |
| Chain | Residue |
| C | TRP197 |
| B | LEU94 |
| B | ALA95 |
| B | GLN97 |
| B | TRP177 |
| site_id | CC2 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE TRS C 485 |
| Chain | Residue |
| A | ASP132 |
| A | HIS136 |
| A | HOH597 |
| A | HOH618 |
| C | ASN75 |
| C | ARG91 |
| C | PHE92 |
| C | HOH514 |
| C | HOH542 |
| C | HOH590 |
| site_id | CC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO C 486 |
| Chain | Residue |
| C | TYR237 |
| C | GLU281 |
| C | TRP285 |
| C | GLN326 |
| C | HOH512 |
| C | HOH1734 |
| C | HOH2196 |
| site_id | CC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO C 487 |
| Chain | Residue |
| C | GLU172 |
| C | TRP177 |
| C | TYR237 |
| C | HOH987 |
| C | HOH1734 |
| C | HOH2196 |
| site_id | CC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO C 488 |
| Chain | Residue |
| C | HIS235 |
| C | PHE236 |
| C | TYR237 |
| C | PHE378 |
| C | MET382 |
| C | HOH1703 |
| site_id | CC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO C 489 |
| Chain | Residue |
| B | GLY180 |
| B | HIS181 |
| C | ARG189 |
| C | GLU193 |
| C | HOH796 |
| site_id | CC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO C 490 |
| Chain | Residue |
| C | VAL362 |
| C | LYS363 |
| C | THR364 |
| C | HOH1116 |
| site_id | CC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO C 491 |
| Chain | Residue |
| C | ASN142 |
| C | LYS144 |
| C | PHE201 |
| C | ASP202 |
| site_id | CC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO C 492 |
| Chain | Residue |
| C | TYR371 |
| site_id | DC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO C 493 |
| Chain | Residue |
| C | GLU255 |
| C | HOH910 |
| F | LYS261 |
| F | LYS262 |
| site_id | DC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO D 485 |
| Chain | Residue |
| D | TYR237 |
| D | GLU281 |
| D | TRP285 |
| D | GLN326 |
| D | HOH500 |
| D | HOH830 |
| D | HOH1933 |
| site_id | DC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO D 486 |
| Chain | Residue |
| D | GLU172 |
| D | TRP177 |
| D | TYR237 |
| D | HOH1403 |
| D | HOH1933 |
| site_id | DC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO D 487 |
| Chain | Residue |
| D | HIS235 |
| D | PHE236 |
| D | TYR237 |
| D | PHE378 |
| D | HOH1079 |
| D | HOH1574 |
| site_id | DC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO D 488 |
| Chain | Residue |
| D | ARG189 |
| D | GLU193 |
| D | HOH839 |
| D | HOH1709 |
| E | GLY180 |
| E | HIS181 |
| site_id | DC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO D 489 |
| Chain | Residue |
| D | VAL13 |
| D | LYS314 |
| D | VAL362 |
| D | LYS363 |
| D | THR364 |
| site_id | DC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO D 490 |
| Chain | Residue |
| D | ASN142 |
| D | LYS144 |
| D | PHE201 |
| site_id | DC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO D 491 |
| Chain | Residue |
| D | TYR244 |
| site_id | DC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO D 492 |
| Chain | Residue |
| D | TRP197 |
| D | VAL200 |
| D | HOH1017 |
| E | TRP177 |
| site_id | EC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO D 493 |
| Chain | Residue |
| A | LYS261 |
| D | GLU255 |
| site_id | EC2 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE TRS D 494 |
| Chain | Residue |
| D | ASN75 |
| D | ARG91 |
| D | PHE92 |
| D | HOH509 |
| D | HOH516 |
| D | HOH669 |
| D | HOH795 |
| F | ASP132 |
| F | LEU135 |
| F | HIS136 |
| F | HOH562 |
| site_id | EC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE TRS E 485 |
| Chain | Residue |
| D | ASP132 |
| D | HIS136 |
| D | HOH2250 |
| D | HOH2251 |
| E | ASN75 |
| E | PHE92 |
| E | HOH603 |
| E | HOH2253 |
| E | HOH2286 |
| site_id | EC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO E 486 |
| Chain | Residue |
| E | TYR237 |
| E | GLU281 |
| E | TRP285 |
| E | GLN326 |
| E | LEU331 |
| E | HOH543 |
| E | HOH2271 |
| E | HOH2273 |
| site_id | EC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO E 487 |
| Chain | Residue |
| E | GLU172 |
| E | TRP177 |
| E | TYR237 |
| E | HOH543 |
| E | HOH944 |
| site_id | EC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO E 488 |
| Chain | Residue |
| E | HIS235 |
| E | PHE236 |
| E | TYR237 |
| E | PHE378 |
| E | HOH1627 |
| site_id | EC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO E 489 |
| Chain | Residue |
| E | ARG189 |
| E | GLU193 |
| E | HOH781 |
| F | GLY180 |
| F | HIS181 |
| site_id | EC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO E 490 |
| Chain | Residue |
| E | LYS314 |
| E | LYS363 |
| E | THR364 |
| site_id | EC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO E 491 |
| Chain | Residue |
| E | ASN142 |
| E | LYS144 |
| E | PHE201 |
| E | ASP202 |
| E | HOH598 |
| site_id | FC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO E 492 |
| Chain | Residue |
| E | TYR244 |
| E | TYR371 |
| site_id | FC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO E 493 |
| Chain | Residue |
| E | VAL200 |
| E | HOH1131 |
| F | TRP177 |
| site_id | FC3 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE TRS F 485 |
| Chain | Residue |
| E | ASP132 |
| E | LEU135 |
| E | HIS136 |
| E | HOH560 |
| F | ASN75 |
| F | ARG91 |
| F | PHE92 |
| F | HOH576 |
| F | HOH848 |
| F | HOH2302 |
| F | HOH2303 |
| site_id | FC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO F 486 |
| Chain | Residue |
| F | LEU28 |
| F | TYR237 |
| F | GLU281 |
| F | TRP285 |
| F | GLN326 |
| F | HOH807 |
| F | HOH2312 |
| F | HOH2313 |
| site_id | FC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO F 487 |
| Chain | Residue |
| F | GLU172 |
| F | TRP177 |
| F | TYR237 |
| F | HOH642 |
| F | HOH807 |
| site_id | FC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO F 488 |
| Chain | Residue |
| F | HIS235 |
| F | PHE236 |
| F | TYR237 |
| F | PHE378 |
| F | MET382 |
| F | HOH1957 |
| site_id | FC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO F 489 |
| Chain | Residue |
| D | GLY180 |
| D | HIS181 |
| F | ARG189 |
| F | GLU193 |
| site_id | FC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO F 490 |
| Chain | Residue |
| F | LYS314 |
| F | LEU361 |
| F | VAL362 |
| F | LYS363 |
| F | THR364 |
| site_id | FC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO F 491 |
| Chain | Residue |
| F | ASN142 |
| F | LYS144 |
| F | PHE201 |
| F | ASP202 |
| F | HOH684 |
| F | HOH961 |
| site_id | GC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO F 492 |
| Chain | Residue |
| F | TYR244 |
| F | TYR371 |
| F | HOH1546 |
| F | HOH1548 |
| site_id | GC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO F 493 |
| Chain | Residue |
| F | HOH1497 |
