Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3TKG

crystal structure of HIV model protease precursor/saquinavir complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
C0004190molecular_functionaspartic-type endopeptidase activity
C0006508biological_processproteolysis
D0004190molecular_functionaspartic-type endopeptidase activity
D0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 911
ChainResidue
ATHR74
AASN88
DARG41

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 921
ChainResidue
ALYS45
AMET46
AILE47
BGLN61

site_idAC3
Number of Residues25
DetailsBINDING SITE FOR RESIDUE ROC B 801
ChainResidue
AASP25
AGLY27
AALA28
AASP29
AASP30
AGLY48
AGLY49
AILE50
ATHR80
APRO81
AILE84
BARG8
BASP25
BGLY27
BASP29
BASP30
BILE47
BGLY48
BGLY49
BILE50
BTHR80
BPRO81
BILE84
ATRP6
AARG8

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 913
ChainResidue
BTHR74
BASN88

site_idAC5
Number of Residues26
DetailsBINDING SITE FOR RESIDUE ROC C 901
ChainResidue
CTRP6
CARG8
CASP25
CGLY27
CALA28
CASP29
CASP30
CILE47
CGLY48
CGLY49
CILE50
CTHR80
CILE84
CHOH1004
CHOH1010
DARG8
DASP25
DGLY27
DASP29
DASP30
DILE47
DGLY48
DGLY49
DILE50
DPRO81
DILE84

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL C 912
ChainResidue
BARG41
CTHR74
CASN88

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL D 914
ChainResidue
DGLY73
DTHR74
DASN88

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: For protease activity; shared with dimeric partner => ECO:0000255|PROSITE-ProRule:PRU10094, ECO:0000269|PubMed:12924029
ChainResidueDetails
AASP25
BASP25
CASP25
DASP25

site_idSWS_FT_FI2
Number of Residues4
DetailsSITE: Cleavage; by viral protease
ChainResidueDetails
APHE-1
BPHE0
CPHE-1
DPHE0

site_idSWS_FT_FI3
Number of Residues4
DetailsSITE: Cleavage; by viral protease => ECO:0000269|PubMed:2476069
ChainResidueDetails
APHE99
BPHE99
CPHE99
DPHE99

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon