Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3THQ

Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with 6-amino-UMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0005829cellular_componentcytosol
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0016831molecular_functioncarboxy-lyase activity
B0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE NUP A 1000
ChainResidue
AASP20
AARG203
AHOH249
AHOH251
AHOH255
AHOH258
AHOH263
AHOH269
BASP75
BILE76
BTHR79
ALYS42
AASP70
ALYS72
AMET126
ASER127
APRO180
AGLN185
AGLY202

site_idAC2
Number of Residues19
DetailsBINDING SITE FOR RESIDUE NUP B 1000
ChainResidue
AASP75
AILE76
ATHR79
BASP20
BLYS42
BASP70
BLYS72
BMET126
BSER127
BPRO180
BGLN185
BGLY202
BARG203
BHOH252
BHOH256
BHOH257
BHOH259
BHOH262
BHOH284

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EPE B 3380
ChainResidue
BPRO129
BSER158
BTHR159
BPRO161
BGLN185
BHOH283

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. IIaDfKvaDIPeTN
ChainResidueDetails
AILE67-ASN80

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor
ChainResidueDetails
ALYS72
BLYS72

site_idSWS_FT_FI2
Number of Residues14
DetailsBINDING:
ChainResidueDetails
AASP20
BASP70
BSER127
BPRO180
BGLY202
BARG203
ALYS42
AASP70
ASER127
APRO180
AGLY202
AARG203
BASP20
BLYS42

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon