3T9C
Crystal structure of the catalytic domain of human diphosphoinositol pentakisphosphate kinase 2 (PPIP5K2) in complex with AMPPNP and inositol hexakisphosphate (IP6)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000829 | molecular_function | inositol heptakisphosphate kinase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 28 |
Details | BINDING SITE FOR RESIDUE ANP A 401 |
Chain | Residue |
A | HOH13 |
A | GLU238 |
A | PHE239 |
A | MET240 |
A | ASP246 |
A | LYS248 |
A | SER264 |
A | ASP309 |
A | LEU311 |
A | CYS320 |
A | ASP321 |
A | ARG134 |
A | ASN323 |
A | HOH473 |
A | HOH483 |
A | HOH484 |
A | IHP501 |
A | MG601 |
A | MG602 |
A | HOH609 |
A | HOH728 |
A | PRO149 |
A | VAL185 |
A | LYS187 |
A | HIS194 |
A | LEU211 |
A | ARG213 |
A | GLU237 |
site_id | AC2 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE IHP A 501 |
Chain | Residue |
A | HOH30 |
A | HOH35 |
A | LYS53 |
A | LYS54 |
A | ARG213 |
A | LYS214 |
A | LYS248 |
A | ARG262 |
A | ARG281 |
A | SER326 |
A | LYS329 |
A | HOH393 |
A | ANP401 |
A | HOH446 |
A | HOH462 |
A | HOH466 |
A | HOH485 |
A | HOH528 |
A | HOH532 |
A | HOH609 |
A | HOH645 |
A | HOH716 |
A | HOH736 |
A | HOH760 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 601 |
Chain | Residue |
A | HOH13 |
A | ASP321 |
A | ASN323 |
A | ANP401 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 602 |
Chain | Residue |
A | ASP309 |
A | ASP321 |
A | ANP401 |
A | HOH484 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 603 |
Chain | Residue |
A | SER68 |
A | PHE70 |
A | ILE73 |
A | HOH513 |
A | HOH535 |
A | HOH749 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 604 |
Chain | Residue |
A | HOH430 |
A | HOH462 |
A | HOH476 |
A | HOH478 |
A | HOH488 |
A | HOH531 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D, ECO:0007744|PDB:3T9E, ECO:0007744|PDB:3T9F |
Chain | Residue | Details |
A | LYS53 | |
A | LYS248 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54, ECO:0007744|PDB:3T7A, ECO:0007744|PDB:3T99, ECO:0007744|PDB:3T9A, ECO:0007744|PDB:3T9B, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D, ECO:0007744|PDB:3T9E, ECO:0007744|PDB:3T9F |
Chain | Residue | Details |
A | ARG134 | |
A | LYS187 | |
A | HIS194 | |
A | GLU237 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T9A, ECO:0007744|PDB:3T9B, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D |
Chain | Residue | Details |
A | ARG213 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54, ECO:0007744|PDB:3T9A, ECO:0007744|PDB:3T9B, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D |
Chain | Residue | Details |
A | ASP246 |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9E, ECO:0007744|PDB:3T9F |
Chain | Residue | Details |
A | ARG262 |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54, ECO:0007744|PDB:3T7A |
Chain | Residue | Details |
A | SER264 |
site_id | SWS_FT_FI7 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54, ECO:0007744|PDB:3T7A, ECO:0007744|PDB:3T99, ECO:0007744|PDB:3T9B, ECO:0007744|PDB:3T9C, ECO:0007744|PDB:3T9D, ECO:0007744|PDB:3T9E, ECO:0007744|PDB:3T9F |
Chain | Residue | Details |
A | ASP309 |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T54 |
Chain | Residue | Details |
A | ASP321 |
site_id | SWS_FT_FI9 |
Number of Residues | 1 |
Details | BINDING: BINDING => ECO:0000269|PubMed:22119861, ECO:0007744|PDB:3T9D, ECO:0007744|PDB:3T9E |
Chain | Residue | Details |
A | SER326 |
site_id | SWS_FT_FI10 |
Number of Residues | 1 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER223 |