3T1H
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0003723 | molecular_function | RNA binding |
| B | 0003735 | molecular_function | structural constituent of ribosome |
| B | 0005840 | cellular_component | ribosome |
| B | 0006412 | biological_process | translation |
| B | 0015935 | cellular_component | small ribosomal subunit |
| B | 0019843 | molecular_function | rRNA binding |
| B | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0003676 | molecular_function | nucleic acid binding |
| C | 0003723 | molecular_function | RNA binding |
| C | 0003729 | molecular_function | mRNA binding |
| C | 0003735 | molecular_function | structural constituent of ribosome |
| C | 0005840 | cellular_component | ribosome |
| C | 0006412 | biological_process | translation |
| C | 0019843 | molecular_function | rRNA binding |
| C | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0003723 | molecular_function | RNA binding |
| D | 0003735 | molecular_function | structural constituent of ribosome |
| D | 0005840 | cellular_component | ribosome |
| D | 0006412 | biological_process | translation |
| D | 0015935 | cellular_component | small ribosomal subunit |
| D | 0019843 | molecular_function | rRNA binding |
| D | 0042274 | biological_process | ribosomal small subunit biogenesis |
| D | 0046872 | molecular_function | metal ion binding |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0003723 | molecular_function | RNA binding |
| E | 0003735 | molecular_function | structural constituent of ribosome |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0005840 | cellular_component | ribosome |
| E | 0006412 | biological_process | translation |
| E | 0015935 | cellular_component | small ribosomal subunit |
| E | 0019843 | molecular_function | rRNA binding |
| E | 1990904 | cellular_component | ribonucleoprotein complex |
| F | 0003723 | molecular_function | RNA binding |
| F | 0003735 | molecular_function | structural constituent of ribosome |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005840 | cellular_component | ribosome |
| F | 0006412 | biological_process | translation |
| F | 0019843 | molecular_function | rRNA binding |
| F | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| F | 1990904 | cellular_component | ribonucleoprotein complex |
| G | 0000049 | molecular_function | tRNA binding |
| G | 0003723 | molecular_function | RNA binding |
| G | 0003735 | molecular_function | structural constituent of ribosome |
| G | 0005840 | cellular_component | ribosome |
| G | 0006412 | biological_process | translation |
| G | 0015935 | cellular_component | small ribosomal subunit |
| G | 0019843 | molecular_function | rRNA binding |
| G | 1990904 | cellular_component | ribonucleoprotein complex |
| H | 0003723 | molecular_function | RNA binding |
| H | 0003735 | molecular_function | structural constituent of ribosome |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0005840 | cellular_component | ribosome |
| H | 0006412 | biological_process | translation |
| H | 0019843 | molecular_function | rRNA binding |
| H | 1990904 | cellular_component | ribonucleoprotein complex |
| I | 0000049 | molecular_function | tRNA binding |
| I | 0003723 | molecular_function | RNA binding |
| I | 0003735 | molecular_function | structural constituent of ribosome |
| I | 0005737 | cellular_component | cytoplasm |
| I | 0005840 | cellular_component | ribosome |
| I | 0006412 | biological_process | translation |
| I | 0015935 | cellular_component | small ribosomal subunit |
| I | 0019843 | molecular_function | rRNA binding |
| I | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| I | 1990904 | cellular_component | ribonucleoprotein complex |
| J | 0000049 | molecular_function | tRNA binding |
| J | 0003723 | molecular_function | RNA binding |
| J | 0003735 | molecular_function | structural constituent of ribosome |
| J | 0005840 | cellular_component | ribosome |
| J | 0006412 | biological_process | translation |
| J | 0019843 | molecular_function | rRNA binding |
| J | 1990904 | cellular_component | ribonucleoprotein complex |
| K | 0003723 | molecular_function | RNA binding |
| K | 0003735 | molecular_function | structural constituent of ribosome |
| K | 0005840 | cellular_component | ribosome |
| K | 0006412 | biological_process | translation |
| K | 0019843 | molecular_function | rRNA binding |
| K | 1990904 | cellular_component | ribonucleoprotein complex |
| L | 0000049 | molecular_function | tRNA binding |
| L | 0003723 | molecular_function | RNA binding |
| L | 0003735 | molecular_function | structural constituent of ribosome |
| L | 0005840 | cellular_component | ribosome |
| L | 0006412 | biological_process | translation |
| L | 0015935 | cellular_component | small ribosomal subunit |
| L | 0019843 | molecular_function | rRNA binding |
| L | 1990904 | cellular_component | ribonucleoprotein complex |
| M | 0000049 | molecular_function | tRNA binding |
| M | 0003676 | molecular_function | nucleic acid binding |
| M | 0003723 | molecular_function | RNA binding |
| M | 0003735 | molecular_function | structural constituent of ribosome |
| M | 0005829 | cellular_component | cytosol |
| M | 0005840 | cellular_component | ribosome |
| M | 0006412 | biological_process | translation |
| M | 0015935 | cellular_component | small ribosomal subunit |
| M | 0019843 | molecular_function | rRNA binding |
| M | 1990904 | cellular_component | ribonucleoprotein complex |
| N | 0003723 | molecular_function | RNA binding |
| N | 0003735 | molecular_function | structural constituent of ribosome |
| N | 0005737 | cellular_component | cytoplasm |
| N | 0005840 | cellular_component | ribosome |
| N | 0006412 | biological_process | translation |
| N | 0008270 | molecular_function | zinc ion binding |
| N | 0015935 | cellular_component | small ribosomal subunit |
| N | 0019843 | molecular_function | rRNA binding |
| N | 0046872 | molecular_function | metal ion binding |
| N | 1990904 | cellular_component | ribonucleoprotein complex |
| O | 0003723 | molecular_function | RNA binding |
| O | 0003735 | molecular_function | structural constituent of ribosome |
| O | 0005737 | cellular_component | cytoplasm |
| O | 0005840 | cellular_component | ribosome |
| O | 0006412 | biological_process | translation |
| O | 0019843 | molecular_function | rRNA binding |
| O | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| O | 1990904 | cellular_component | ribonucleoprotein complex |
| P | 0003735 | molecular_function | structural constituent of ribosome |
| P | 0005737 | cellular_component | cytoplasm |
| P | 0005840 | cellular_component | ribosome |
| P | 0006412 | biological_process | translation |
| P | 0015935 | cellular_component | small ribosomal subunit |
| P | 1990904 | cellular_component | ribonucleoprotein complex |
| Q | 0003723 | molecular_function | RNA binding |
| Q | 0003735 | molecular_function | structural constituent of ribosome |
| Q | 0005840 | cellular_component | ribosome |
| Q | 0006412 | biological_process | translation |
| Q | 0019843 | molecular_function | rRNA binding |
| Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
| Q | 1990904 | cellular_component | ribonucleoprotein complex |
| R | 0003723 | molecular_function | RNA binding |
| R | 0003735 | molecular_function | structural constituent of ribosome |
| R | 0005840 | cellular_component | ribosome |
| R | 0006412 | biological_process | translation |
| R | 0019843 | molecular_function | rRNA binding |
| R | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| R | 1990904 | cellular_component | ribonucleoprotein complex |
| S | 0000028 | biological_process | ribosomal small subunit assembly |
| S | 0003723 | molecular_function | RNA binding |
| S | 0003735 | molecular_function | structural constituent of ribosome |
| S | 0005737 | cellular_component | cytoplasm |
| S | 0005840 | cellular_component | ribosome |
| S | 0006412 | biological_process | translation |
| S | 0015935 | cellular_component | small ribosomal subunit |
| S | 0019843 | molecular_function | rRNA binding |
| S | 1990904 | cellular_component | ribonucleoprotein complex |
| T | 0003723 | molecular_function | RNA binding |
| T | 0003735 | molecular_function | structural constituent of ribosome |
| T | 0005840 | cellular_component | ribosome |
| T | 0006412 | biological_process | translation |
| T | 0015935 | cellular_component | small ribosomal subunit |
| T | 0019843 | molecular_function | rRNA binding |
| T | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
| T | 1990904 | cellular_component | ribonucleoprotein complex |
| V | 0003723 | molecular_function | RNA binding |
| V | 0005840 | cellular_component | ribosome |
| V | 0019843 | molecular_function | rRNA binding |
| V | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1601 |
| Chain | Residue |
| A | C684 |
| A | G686 |
| A | C1432 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1602 |
| Chain | Residue |
| A | G151 |
| A | G152 |
| A | U158 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1603 |
| Chain | Residue |
| A | C264 |
| A | G252 |
| A | G253 |
| A | G261 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1604 |
| Chain | Residue |
| A | G75 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1605 |
| Chain | Residue |
| A | G279 |
| A | G280 |
| site_id | AC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1607 |
| Chain | Residue |
| A | C1317 |
| site_id | AC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1608 |
| Chain | Residue |
| A | C1131 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1609 |
| Chain | Residue |
| A | G560 |
| A | U796 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1610 |
| Chain | Residue |
| A | U499 |
| A | C502 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1613 |
| Chain | Residue |
| A | G707 |
| A | G708 |
| A | G831 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1614 |
| Chain | Residue |
| A | A146 |
| A | C147 |
| A | C163 |
| site_id | BC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1615 |
| Chain | Residue |
| A | G564 |
| A | G741 |
| site_id | BC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1616 |
| Chain | Residue |
| A | G476 |
| site_id | BC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1617 |
| Chain | Residue |
| A | G1171 |
| site_id | BC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1618 |
| Chain | Residue |
| A | G304 |
| site_id | BC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1619 |
| Chain | Residue |
| A | U1072 |
| site_id | BC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1620 |
| Chain | Residue |
| A | C307 |
| A | A308 |
| site_id | BC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1621 |
| Chain | Residue |
| A | G575 |
| A | G576 |
| A | G577 |
| A | U629 |
| site_id | CC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1622 |
| Chain | Residue |
| A | U642 |
| A | G643 |
| A | G644 |
| site_id | CC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1623 |
| Chain | Residue |
| A | A1185 |
| N | ALA2 |
| site_id | CC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1624 |
| Chain | Residue |
| A | A982 |
| site_id | CC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1625 |
| Chain | Residue |
| A | G255 |
| A | U256 |
| A | U259 |
| site_id | CC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1626 |
| Chain | Residue |
| A | C58 |
| A | U382 |
| A | G383 |
| site_id | CC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1627 |
| Chain | Residue |
| A | G11 |
| A | U12 |
| A | G21 |
| A | G22 |
| site_id | CC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1628 |
| Chain | Residue |
| A | G458 |
| A | G459 |
| site_id | CC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1629 |
| Chain | Residue |
| A | A648 |
| A | G649 |
| A | G650 |
| site_id | CC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1630 |
| Chain | Residue |
| A | G867 |
| A | G883 |
| site_id | DC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1631 |
| Chain | Residue |
| A | G31 |
| A | C47 |
| A | C48 |
| site_id | DC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1632 |
| Chain | Residue |
| A | G724 |
| A | G725 |
| site_id | DC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1635 |
| Chain | Residue |
| A | G292 |
| site_id | DC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1636 |
| Chain | Residue |
| A | G559 |
| A | G560 |
| site_id | DC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1637 |
| Chain | Residue |
| A | C739 |
| A | U740 |
| site_id | DC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1638 |
| Chain | Residue |
| A | G1414 |
| site_id | DC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1640 |
| Chain | Residue |
| A | G1493 |
| A | G1494 |
| site_id | DC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1641 |
| Chain | Residue |
| A | G953 |
| A | U1339 |
| A | C1340 |
| site_id | DC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1643 |
| Chain | Residue |
| A | C917 |
| site_id | EC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1644 |
| Chain | Residue |
| A | G433 |
| A | U478 |
| site_id | EC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1645 |
| Chain | Residue |
| A | C732 |
| A | G733 |
| site_id | EC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1646 |
| Chain | Residue |
| A | A667 |
| A | G668 |
| site_id | EC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1647 |
| Chain | Residue |
| A | C569 |
| site_id | EC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1648 |
| Chain | Residue |
| A | A749 |
| A | C795 |
| site_id | EC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1649 |
| Chain | Residue |
| A | A751 |
| site_id | EC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1651 |
| Chain | Residue |
| A | G786 |
| site_id | EC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1652 |
| Chain | Residue |
| A | A760 |
| site_id | EC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1653 |
| Chain | Residue |
| A | A763 |
| site_id | FC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1654 |
| Chain | Residue |
| A | G559 |
| A | C561 |
| A | C800 |
| site_id | FC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1655 |
| Chain | Residue |
| A | U848 |
| site_id | FC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1656 |
| Chain | Residue |
| A | G357 |
| site_id | FC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1657 |
| Chain | Residue |
| A | C448 |
| site_id | FC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1658 |
| Chain | Residue |
| A | C452 |
| A | C455 |
| site_id | FC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1659 |
| Chain | Residue |
| A | A493 |
| A | A492 |
| site_id | FC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1660 |
| Chain | Residue |
| A | A542 |
| A | U543 |
| A | C545 |
| site_id | FC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1662 |
| Chain | Residue |
| A | A555 |
| A | A802 |
| site_id | FC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1663 |
| Chain | Residue |
| A | G21 |
| site_id | GC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1664 |
| Chain | Residue |
| A | C48 |
| A | G108 |
| site_id | GC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1665 |
| Chain | Residue |
| A | G578 |
| A | C579 |
| A | G580 |
| A | U581 |
| site_id | GC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1666 |
| Chain | Residue |
| A | G820 |
| A | G821 |
| site_id | GC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1667 |
| Chain | Residue |
| A | G851 |
| site_id | GC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1668 |
| Chain | Residue |
| A | G835 |
| A | G846 |
| site_id | GC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1669 |
| Chain | Residue |
| A | G553 |
| A | A850 |
| site_id | GC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1671 |
| Chain | Residue |
| A | A837 |
| site_id | GC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1672 |
| Chain | Residue |
| A | U619 |
| A | G620 |
| A | G621 |
| site_id | GC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1673 |
| Chain | Residue |
| A | G862 |
| A | G863 |
| A | U888 |
| site_id | HC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1675 |
| Chain | Residue |
| A | A914 |
| site_id | HC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1676 |
| Chain | Residue |
| A | C911 |
| A | U1326 |
| site_id | HC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1679 |
| Chain | Residue |
| A | G1352 |
| site_id | HC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1683 |
| Chain | Residue |
| A | C617 |
| A | G618 |
| A | U619 |
| site_id | HC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1684 |
| Chain | Residue |
| A | U588 |
| A | G589 |
| site_id | HC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1685 |
| Chain | Residue |
| A | G665 |
| site_id | HC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1686 |
| Chain | Residue |
| A | G570 |
| A | G571 |
| site_id | HC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1688 |
| Chain | Residue |
| A | G921 |
| A | G922 |
| site_id | HC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1689 |
| Chain | Residue |
| A | U1332 |
| site_id | IC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1690 |
| Chain | Residue |
| A | A941 |
| A | U1180 |
| site_id | IC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 1691 |
| Chain | Residue |
| A | C956 |
| A | C957 |
| A | U958 |
| A | G1202 |
| A | G1203 |
| site_id | IC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1692 |
| Chain | Residue |
| A | A1341 |
| site_id | IC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG S 101 |
| Chain | Residue |
| S | GLU17 |
| site_id | IC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1694 |
| Chain | Residue |
| A | C1111 |
| site_id | IC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1695 |
| Chain | Residue |
| A | G1275 |
| site_id | IC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1696 |
| Chain | Residue |
| A | G1403 |
| A | G1404 |
| site_id | IC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1697 |
| Chain | Residue |
| A | G1423 |
| T | THR35 |
| site_id | IC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1698 |
| Chain | Residue |
| A | G1438 |
| A | G1439 |
| site_id | JC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1699 |
| Chain | Residue |
| A | G1417 |
| site_id | JC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1700 |
| Chain | Residue |
| A | A1445 |
| A | G1446 |
| site_id | JC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1701 |
| Chain | Residue |
| A | U1458 |
| site_id | JC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1702 |
| Chain | Residue |
| A | U13 |
| A | A892 |
| site_id | JC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1703 |
| Chain | Residue |
| A | A165 |
| site_id | JC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1705 |
| Chain | Residue |
| A | G246 |
| A | C267 |
| site_id | JC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1706 |
| Chain | Residue |
| A | U244 |
| A | A245 |
| A | G270 |
| A | G271 |
| site_id | JC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1707 |
| Chain | Residue |
| A | G296 |
| site_id | JC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1708 |
| Chain | Residue |
| A | G294 |
| A | A295 |
| A | G541 |
| A | G549 |
| site_id | KC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1709 |
| Chain | Residue |
| A | G319 |
| site_id | KC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1710 |
| Chain | Residue |
| A | U56 |
| site_id | KC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1711 |
| Chain | Residue |
| A | G401 |
| A | A479 |
| A | A480 |
| site_id | KC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1712 |
| Chain | Residue |
| A | A555 |
| A | A556 |
| A | A557 |
| site_id | KC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1713 |
| Chain | Residue |
| A | G632 |
| A | G633 |
| site_id | KC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1714 |
| Chain | Residue |
| A | G577 |
| A | G578 |
| site_id | KC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1715 |
| Chain | Residue |
| A | A591 |
| A | G593 |
| site_id | KC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1716 |
| Chain | Residue |
| A | G683 |
| site_id | KC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1717 |
| Chain | Residue |
| A | C67 |
| site_id | LC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1718 |
| Chain | Residue |
| A | G865 |
| site_id | LC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1719 |
| Chain | Residue |
| A | G871 |
| A | G872 |
| site_id | LC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1720 |
| Chain | Residue |
| A | G875 |
| site_id | LC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1721 |
| Chain | Residue |
| A | A53 |
| A | A348 |
| site_id | LC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1722 |
| Chain | Residue |
| A | U1044 |
| site_id | LC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1723 |
| Chain | Residue |
| A | U1047 |
| A | C1048 |
| site_id | LC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1724 |
| Chain | Residue |
| A | A1092 |
| A | C1170 |
| site_id | LC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1725 |
| Chain | Residue |
| A | U840 |
| site_id | LC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1726 |
| Chain | Residue |
| A | A842 |
| A | C843 |
| A | G1061 |
| site_id | MC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1727 |
| Chain | Residue |
| A | A1049 |
| A | G1050 |
| A | G1076 |
| A | G1369 |
| site_id | MC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1728 |
| Chain | Residue |
| A | G1076 |
| A | U1077 |
| A | C1078 |
| A | G1090 |
| site_id | MC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1729 |
| Chain | Residue |
| A | U1065 |
| A | U1068 |
| site_id | MC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1731 |
| Chain | Residue |
| A | G1205 |
| site_id | MC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1732 |
| Chain | Residue |
| A | G1247 |
| site_id | MC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1733 |
| Chain | Residue |
| A | G115 |
| A | C228 |
| site_id | MC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1734 |
| Chain | Residue |
| A | G205 |
| A | G206 |
| site_id | MC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1735 |
| Chain | Residue |
| A | U122 |
| site_id | MC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1736 |
| Chain | Residue |
| A | G880 |
| site_id | NC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1737 |
| Chain | Residue |
| A | G928 |
| A | U929 |
| A | C947 |
| A | C1211 |
| site_id | NC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1738 |
| Chain | Residue |
| A | G930 |
| site_id | NC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 1740 |
| Chain | Residue |
| A | C901 |
| A | G902 |
| A | G904 |
| A | U1372 |
| A | U1373 |
| site_id | NC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG L 201 |
| Chain | Residue |
| A | U535 |
| L | ARG89 |
| site_id | NC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 1744 |
| Chain | Residue |
| A | U1475 |
| A | A1476 |
| A | A1477 |
| A | G1481 |
| A | G1482 |
| site_id | NC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1745 |
| Chain | Residue |
| A | G64 |
| A | A94 |
| site_id | NC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1749 |
| Chain | Residue |
| A | A518 |
| A | C519 |
| site_id | NC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1750 |
| Chain | Residue |
| A | G132 |
| A | G133 |
| site_id | NC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1752 |
| Chain | Residue |
| A | G162 |
| site_id | OC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1753 |
| Chain | Residue |
| A | U174 |
| A | A201 |
| site_id | OC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1754 |
| Chain | Residue |
| A | G175 |
| A | U176 |
| A | G177 |
| site_id | OC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1755 |
| Chain | Residue |
| A | C180 |
| A | U196 |
| A | G197 |
| site_id | OC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1756 |
| Chain | Residue |
| A | G183 |
| A | C184 |
| A | G193 |
| site_id | OC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1757 |
| Chain | Residue |
| A | G123 |
| A | C187 |
| A | U188 |
| A | G190 |
| site_id | OC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1759 |
| Chain | Residue |
| A | A109 |
| A | G110 |
| A | G284 |
| site_id | OC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1760 |
| Chain | Residue |
| A | G288 |
| A | U299 |
| A | G300 |
| site_id | OC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1761 |
| Chain | Residue |
| A | C347 |
| site_id | OC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 1762 |
| Chain | Residue |
| A | C367 |
| A | U370 |
| A | G371 |
| A | U382 |
| site_id | PC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1763 |
| Chain | Residue |
| A | G405 |
| A | A426 |
| site_id | PC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1764 |
| Chain | Residue |
| A | C487 |
| A | G488 |
| site_id | PC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1765 |
| Chain | Residue |
| A | G104 |
| site_id | PC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1766 |
| Chain | Residue |
| A | U688 |
| A | A689 |
| site_id | PC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1767 |
| Chain | Residue |
| A | G692 |
| A | G693 |
| site_id | PC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1768 |
| Chain | Residue |
| A | G759 |
| site_id | PC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1769 |
| Chain | Residue |
| A | C791 |
| site_id | PC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1770 |
| Chain | Residue |
| A | A765 |
| A | A777 |
| site_id | PC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1772 |
| Chain | Residue |
| A | U127 |
| A | U224 |
| A | G225 |
| site_id | QC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE MG A 1773 |
| Chain | Residue |
| A | U933 |
| A | U934 |
| site_id | QC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1774 |
| Chain | Residue |
| A | G1030 |
| site_id | QC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 1775 |
| Chain | Residue |
| A | G1035 |
| A | G1040 |
| A | C1041 |
| A | G1179 |
| A | U1180 |
| site_id | QC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1776 |
| Chain | Residue |
| A | C1051 |
| site_id | QC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1778 |
| Chain | Residue |
| A | C1284 |
| A | G1285 |
| V | ASP5 |
| site_id | QC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 1779 |
| Chain | Residue |
| A | C1478 |
| A | A1484 |
| A | G1485 |
| site_id | QC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1781 |
| Chain | Residue |
| A | MG1782 |
| site_id | QC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG A 1782 |
| Chain | Residue |
| A | MG1781 |
| site_id | QC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG B 301 |
| Chain | Residue |
| B | GLU20 |
| B | ASP189 |
| B | ASP191 |
| B | ASP205 |
| site_id | RC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ZN D 301 |
| Chain | Residue |
| D | CYS9 |
| D | CYS12 |
| D | LEU19 |
| D | CYS26 |
| D | CYS31 |
| site_id | RC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ZN N 101 |
| Chain | Residue |
| N | CYS24 |
| N | CYS27 |
| N | ARG29 |
| N | CYS40 |
| N | CYS43 |
| site_id | RC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE PAR A 1783 |
| Chain | Residue |
| A | G1387 |
| A | U1388 |
| A | C1389 |
| A | A1390 |
| A | G1468 |
| A | A1469 |
| A | A1470 |
| A | G1471 |
| A | U1472 |
Functional Information from PROSITE/UniProt
| site_id | PS00052 |
| Number of Residues | 27 |
| Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. DvLvtaFInkimrdGKKnlaarIFydA |
| Chain | Residue | Details |
| G | ASP20-ALA46 |
| site_id | PS00053 |
| Number of Residues | 18 |
| Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSkGVLtdreAR |
| Chain | Residue | Details |
| H | GLY108-ARG125 |
| site_id | PS00054 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqaS.GLqVksivDdTPvPHN |
| Chain | Residue | Details |
| K | ILE95-ASN117 |
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR |
| Chain | Residue | Details |
| L | LYS46-ARG53 |
| site_id | PS00056 |
| Number of Residues | 13 |
| Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS |
| Chain | Residue | Details |
| Q | GLY54-SER66 |
| site_id | PS00057 |
| Number of Residues | 24 |
| Details | RIBOSOMAL_S18 Ribosomal protein S18 signature. RDYrn.VevLkrFLSEt.GKIlprRR |
| Chain | Residue | Details |
| R | ARG32-ARG55 |
| site_id | PS00063 |
| Number of Residues | 16 |
| Details | ALDOKETO_REDUCTASE_3 Aldo/keto reductase family putative active site signature. LAKTIKraRIlGLlPF |
| Chain | Residue | Details |
| R | LEU66-PHE81 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqhvpvyItenmVGhkLGEFapT |
| Chain | Residue | Details |
| S | ASN53-THR77 |
| site_id | PS00360 |
| Number of Residues | 19 |
| Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGksGQidAiklGiARAL |
| Chain | Residue | Details |
| I | GLY67-LEU85 |
| site_id | PS00361 |
| Number of Residues | 16 |
| Details | RIBOSOMAL_S10 Ribosomal protein S10 signature. ArrsGAqvsGPIpLPT |
| Chain | Residue | Details |
| J | ALA27-THR42 |
| site_id | PS00362 |
| Number of Residues | 31 |
| Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. LseHLkvhKkDhhShrgLlmMvgqrrrLlrY |
| Chain | Residue | Details |
| O | LEU39-TYR69 |
| site_id | PS00527 |
| Number of Residues | 23 |
| Details | RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CvrcgrarsvyrfFGLCRiCLR |
| Chain | Residue | Details |
| N | ARG23-ARG45 |
| site_id | PS00548 |
| Number of Residues | 35 |
| Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewaaqGrVplHt..LranIDygfalarTtyGvlG |
| Chain | Residue | Details |
| C | ALA163-GLY197 |
| site_id | PS00585 |
| Number of Residues | 33 |
| Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV |
| Chain | Residue | Details |
| E | GLY23-VAL55 |
| site_id | PS00632 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV |
| Chain | Residue | Details |
| D | LEU97-VAL121 |
| site_id | PS00646 |
| Number of Residues | 14 |
| Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ |
| Chain | Residue | Details |
| M | ARG88-GLN101 |
| site_id | PS00962 |
| Number of Residues | 12 |
| Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG |
| Chain | Residue | Details |
| B | VAL7-GLY18 |
| site_id | PS01048 |
| Number of Residues | 10 |
| Details | RIBOSOMAL_S6 Ribosomal protein S6 signature. GlRRLAYpIA |
| Chain | Residue | Details |
| F | GLY44-ALA53 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 45 |
| Details | Coiled coil: {} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 68 |
| Details | Domain: {"description":"KH type-2"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 62 |
| Details | Domain: {"description":"S4 RNA-binding"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"11866529","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 63 |
| Details | Domain: {"description":"S5 DRBM"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 51 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 21 |
| Details | Compositional bias: {"description":"Basic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"3-methylthioaspartic acid","evidences":[{"source":"PubMed","id":"16287167","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"25775268","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
