3T0P
Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006260 | biological_process | DNA replication |
| A | 0006271 | biological_process | DNA strand elongation involved in DNA replication |
| A | 0008408 | molecular_function | 3'-5' exonuclease activity |
| A | 0009360 | cellular_component | DNA polymerase III complex |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0071897 | biological_process | DNA biosynthetic process |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006260 | biological_process | DNA replication |
| B | 0006271 | biological_process | DNA strand elongation involved in DNA replication |
| B | 0008408 | molecular_function | 3'-5' exonuclease activity |
| B | 0009360 | cellular_component | DNA polymerase III complex |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PGR A 373 |
| Chain | Residue |
| A | SER249 |
| A | SER250 |
| A | TYR252 |
| A | LYS350 |
| A | HOH644 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ACT A 376 |
| Chain | Residue |
| A | THR133 |
| A | VAL137 |
| A | GLN140 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE ACT A 378 |
| Chain | Residue |
| A | ASP307 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 382 |
| Chain | Residue |
| A | ASN47 |
| A | MSE49 |
| A | GLU50 |
| A | GLY52 |
| A | VAL233 |
| A | ARG235 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO A 383 |
| Chain | Residue |
| A | LYS19 |
| A | ALA20 |
| A | VAL21 |
| A | PRO22 |
| A | ASP48 |
| A | LYS197 |
| A | EDO388 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO A 384 |
| Chain | Residue |
| A | GLU54 |
| A | ASN229 |
| A | THR231 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO A 385 |
| Chain | Residue |
| A | PRO119 |
| A | TYR120 |
| A | VAL121 |
| A | ARG123 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO A 386 |
| Chain | Residue |
| A | GLU160 |
| A | ARG167 |
| site_id | AC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 388 |
| Chain | Residue |
| A | THR23 |
| A | GLU201 |
| A | LYS204 |
| A | EDO383 |
| A | HOH400 |
| A | HOH460 |
| site_id | BC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO A 389 |
| Chain | Residue |
| A | ASP251 |
| A | TYR252 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO A 391 |
| Chain | Residue |
| A | ASN285 |
| A | ILE315 |
| A | MSE316 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO A 392 |
| Chain | Residue |
| A | GLU226 |
| A | GLU228 |
| B | ASP213 |
| site_id | BC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO A 394 |
| Chain | Residue |
| A | PHE132 |
| A | GLU136 |
| A | ARG139 |
| A | ASP332 |
| site_id | BC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO A 397 |
| Chain | Residue |
| A | LYS243 |
| A | GLN246 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PGR B 374 |
| Chain | Residue |
| B | ASP251 |
| B | TYR252 |
| B | ASP253 |
| B | HOH642 |
| site_id | BC7 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACT B 375 |
| Chain | Residue |
| B | ASN47 |
| B | MSE49 |
| B | GLU50 |
| B | LEU51 |
| B | GLY52 |
| B | PRO119 |
| B | HIS222 |
| B | VAL233 |
| site_id | BC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE ACT B 377 |
| Chain | Residue |
| B | LYS19 |
| B | VAL21 |
| B | PRO22 |
| B | ASP48 |
| B | LYS197 |
| B | GLU201 |
| site_id | BC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE ACT B 379 |
| Chain | Residue |
| B | GLU262 |
| site_id | CC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO B 380 |
| Chain | Residue |
| B | TYR339 |
| B | LYS350 |
| site_id | CC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO B 381 |
| Chain | Residue |
| B | ILE4 |
| B | CYS5 |
| B | SER6 |
| site_id | CC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO B 387 |
| Chain | Residue |
| B | GLU54 |
| B | ASN229 |
| B | THR231 |
| B | HOH603 |
| site_id | CC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO B 390 |
| Chain | Residue |
| B | GLU160 |
| B | GLU162 |
| B | ARG167 |
| site_id | CC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO B 393 |
| Chain | Residue |
| B | LYS104 |
| B | HOH430 |
| B | HOH471 |
| site_id | CC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO B 395 |
| Chain | Residue |
| B | GLN200 |
| B | LYS204 |
| B | HOH410 |
| site_id | CC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO B 396 |
| Chain | Residue |
| B | ARG139 |
| B | HOH536 |
| site_id | CC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL B 398 |
| Chain | Residue |
| B | ARG123 |
