3T0P
Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0006260 | biological_process | DNA replication |
A | 0006271 | biological_process | DNA strand elongation involved in DNA replication |
A | 0008408 | molecular_function | 3'-5' exonuclease activity |
A | 0009360 | cellular_component | DNA polymerase III complex |
A | 0071897 | biological_process | DNA biosynthetic process |
B | 0003677 | molecular_function | DNA binding |
B | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0006260 | biological_process | DNA replication |
B | 0006271 | biological_process | DNA strand elongation involved in DNA replication |
B | 0008408 | molecular_function | 3'-5' exonuclease activity |
B | 0009360 | cellular_component | DNA polymerase III complex |
B | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PGR A 373 |
Chain | Residue |
A | SER249 |
A | SER250 |
A | TYR252 |
A | LYS350 |
A | HOH644 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE ACT A 376 |
Chain | Residue |
A | THR133 |
A | VAL137 |
A | GLN140 |
site_id | AC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE ACT A 378 |
Chain | Residue |
A | ASP307 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 382 |
Chain | Residue |
A | ASN47 |
A | MSE49 |
A | GLU50 |
A | GLY52 |
A | VAL233 |
A | ARG235 |
site_id | AC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO A 383 |
Chain | Residue |
A | LYS19 |
A | ALA20 |
A | VAL21 |
A | PRO22 |
A | ASP48 |
A | LYS197 |
A | EDO388 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO A 384 |
Chain | Residue |
A | GLU54 |
A | ASN229 |
A | THR231 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 385 |
Chain | Residue |
A | PRO119 |
A | TYR120 |
A | VAL121 |
A | ARG123 |
site_id | AC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO A 386 |
Chain | Residue |
A | GLU160 |
A | ARG167 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 388 |
Chain | Residue |
A | THR23 |
A | GLU201 |
A | LYS204 |
A | EDO383 |
A | HOH400 |
A | HOH460 |
site_id | BC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO A 389 |
Chain | Residue |
A | ASP251 |
A | TYR252 |
site_id | BC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO A 391 |
Chain | Residue |
A | ASN285 |
A | ILE315 |
A | MSE316 |
site_id | BC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO A 392 |
Chain | Residue |
A | GLU226 |
A | GLU228 |
B | ASP213 |
site_id | BC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO A 394 |
Chain | Residue |
A | PHE132 |
A | GLU136 |
A | ARG139 |
A | ASP332 |
site_id | BC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO A 397 |
Chain | Residue |
A | LYS243 |
A | GLN246 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PGR B 374 |
Chain | Residue |
B | ASP251 |
B | TYR252 |
B | ASP253 |
B | HOH642 |
site_id | BC7 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE ACT B 375 |
Chain | Residue |
B | ASN47 |
B | MSE49 |
B | GLU50 |
B | LEU51 |
B | GLY52 |
B | PRO119 |
B | HIS222 |
B | VAL233 |
site_id | BC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ACT B 377 |
Chain | Residue |
B | LYS19 |
B | VAL21 |
B | PRO22 |
B | ASP48 |
B | LYS197 |
B | GLU201 |
site_id | BC9 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE ACT B 379 |
Chain | Residue |
B | GLU262 |
site_id | CC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO B 380 |
Chain | Residue |
B | TYR339 |
B | LYS350 |
site_id | CC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO B 381 |
Chain | Residue |
B | ILE4 |
B | CYS5 |
B | SER6 |
site_id | CC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE EDO B 387 |
Chain | Residue |
B | GLU54 |
B | ASN229 |
B | THR231 |
B | HOH603 |
site_id | CC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO B 390 |
Chain | Residue |
B | GLU160 |
B | GLU162 |
B | ARG167 |
site_id | CC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO B 393 |
Chain | Residue |
B | LYS104 |
B | HOH430 |
B | HOH471 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE EDO B 395 |
Chain | Residue |
B | GLN200 |
B | LYS204 |
B | HOH410 |
site_id | CC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE EDO B 396 |
Chain | Residue |
B | ARG139 |
B | HOH536 |
site_id | CC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CL B 398 |
Chain | Residue |
B | ARG123 |