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3SZ9

Crystal structure of human ALDH2 modified with the beta-elimination product of Aldi-3; 1-(4-ethylbenzene)prop-2-en-1-one

Functional Information from GO Data
ChainGOidnamespacecontents
A0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
A0004030molecular_functionaldehyde dehydrogenase [NAD(P)+] activity
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0005975biological_processcarbohydrate metabolic process
A0006066biological_processalcohol metabolic process
A0006068biological_processethanol catabolic process
A0008957molecular_functionphenylacetaldehyde dehydrogenase (NAD+) activity
A0009055molecular_functionelectron transfer activity
A0016491molecular_functionoxidoreductase activity
A0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
A0018937biological_processnitroglycerin metabolic process
A0046185biological_processaldehyde catabolic process
A0051287molecular_functionNAD binding
A0070062cellular_componentextracellular exosome
A0106435molecular_functioncarboxylesterase activity
A1903179biological_processregulation of dopamine biosynthetic process
A1905627biological_processregulation of serotonin biosynthetic process
B0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
B0004030molecular_functionaldehyde dehydrogenase [NAD(P)+] activity
B0005739cellular_componentmitochondrion
B0005759cellular_componentmitochondrial matrix
B0005975biological_processcarbohydrate metabolic process
B0006066biological_processalcohol metabolic process
B0006068biological_processethanol catabolic process
B0008957molecular_functionphenylacetaldehyde dehydrogenase (NAD+) activity
B0009055molecular_functionelectron transfer activity
B0016491molecular_functionoxidoreductase activity
B0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
B0018937biological_processnitroglycerin metabolic process
B0046185biological_processaldehyde catabolic process
B0051287molecular_functionNAD binding
B0070062cellular_componentextracellular exosome
B0106435molecular_functioncarboxylesterase activity
B1903179biological_processregulation of dopamine biosynthetic process
B1905627biological_processregulation of serotonin biosynthetic process
C0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
C0004030molecular_functionaldehyde dehydrogenase [NAD(P)+] activity
C0005739cellular_componentmitochondrion
C0005759cellular_componentmitochondrial matrix
C0005975biological_processcarbohydrate metabolic process
C0006066biological_processalcohol metabolic process
C0006068biological_processethanol catabolic process
C0008957molecular_functionphenylacetaldehyde dehydrogenase (NAD+) activity
C0009055molecular_functionelectron transfer activity
C0016491molecular_functionoxidoreductase activity
C0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
C0018937biological_processnitroglycerin metabolic process
C0046185biological_processaldehyde catabolic process
C0051287molecular_functionNAD binding
C0070062cellular_componentextracellular exosome
C0106435molecular_functioncarboxylesterase activity
C1903179biological_processregulation of dopamine biosynthetic process
C1905627biological_processregulation of serotonin biosynthetic process
D0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
D0004030molecular_functionaldehyde dehydrogenase [NAD(P)+] activity
D0005739cellular_componentmitochondrion
D0005759cellular_componentmitochondrial matrix
D0005975biological_processcarbohydrate metabolic process
D0006066biological_processalcohol metabolic process
D0006068biological_processethanol catabolic process
D0008957molecular_functionphenylacetaldehyde dehydrogenase (NAD+) activity
D0009055molecular_functionelectron transfer activity
D0016491molecular_functionoxidoreductase activity
D0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
D0018937biological_processnitroglycerin metabolic process
D0046185biological_processaldehyde catabolic process
D0051287molecular_functionNAD binding
D0070062cellular_componentextracellular exosome
D0106435molecular_functioncarboxylesterase activity
D1903179biological_processregulation of dopamine biosynthetic process
D1905627biological_processregulation of serotonin biosynthetic process
E0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
E0004030molecular_functionaldehyde dehydrogenase [NAD(P)+] activity
E0005739cellular_componentmitochondrion
E0005759cellular_componentmitochondrial matrix
E0005975biological_processcarbohydrate metabolic process
E0006066biological_processalcohol metabolic process
E0006068biological_processethanol catabolic process
E0008957molecular_functionphenylacetaldehyde dehydrogenase (NAD+) activity
E0009055molecular_functionelectron transfer activity
E0016491molecular_functionoxidoreductase activity
E0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
E0018937biological_processnitroglycerin metabolic process
E0046185biological_processaldehyde catabolic process
E0051287molecular_functionNAD binding
E0070062cellular_componentextracellular exosome
E0106435molecular_functioncarboxylesterase activity
E1903179biological_processregulation of dopamine biosynthetic process
E1905627biological_processregulation of serotonin biosynthetic process
F0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
F0004030molecular_functionaldehyde dehydrogenase [NAD(P)+] activity
F0005739cellular_componentmitochondrion
F0005759cellular_componentmitochondrial matrix
F0005975biological_processcarbohydrate metabolic process
F0006066biological_processalcohol metabolic process
F0006068biological_processethanol catabolic process
F0008957molecular_functionphenylacetaldehyde dehydrogenase (NAD+) activity
F0009055molecular_functionelectron transfer activity
F0016491molecular_functionoxidoreductase activity
F0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
F0018937biological_processnitroglycerin metabolic process
F0046185biological_processaldehyde catabolic process
F0051287molecular_functionNAD binding
F0070062cellular_componentextracellular exosome
F0106435molecular_functioncarboxylesterase activity
F1903179biological_processregulation of dopamine biosynthetic process
F1905627biological_processregulation of serotonin biosynthetic process
G0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
G0004030molecular_functionaldehyde dehydrogenase [NAD(P)+] activity
G0005739cellular_componentmitochondrion
G0005759cellular_componentmitochondrial matrix
G0005975biological_processcarbohydrate metabolic process
G0006066biological_processalcohol metabolic process
G0006068biological_processethanol catabolic process
G0008957molecular_functionphenylacetaldehyde dehydrogenase (NAD+) activity
G0009055molecular_functionelectron transfer activity
G0016491molecular_functionoxidoreductase activity
G0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
G0018937biological_processnitroglycerin metabolic process
G0046185biological_processaldehyde catabolic process
G0051287molecular_functionNAD binding
G0070062cellular_componentextracellular exosome
G0106435molecular_functioncarboxylesterase activity
G1903179biological_processregulation of dopamine biosynthetic process
G1905627biological_processregulation of serotonin biosynthetic process
H0004029molecular_functionaldehyde dehydrogenase (NAD+) activity
H0004030molecular_functionaldehyde dehydrogenase [NAD(P)+] activity
H0005739cellular_componentmitochondrion
H0005759cellular_componentmitochondrial matrix
H0005975biological_processcarbohydrate metabolic process
H0006066biological_processalcohol metabolic process
H0006068biological_processethanol catabolic process
H0008957molecular_functionphenylacetaldehyde dehydrogenase (NAD+) activity
H0009055molecular_functionelectron transfer activity
H0016491molecular_functionoxidoreductase activity
H0016620molecular_functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
H0018937biological_processnitroglycerin metabolic process
H0046185biological_processaldehyde catabolic process
H0051287molecular_functionNAD binding
H0070062cellular_componentextracellular exosome
H0106435molecular_functioncarboxylesterase activity
H1903179biological_processregulation of dopamine biosynthetic process
H1905627biological_processregulation of serotonin biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 601
ChainResidue
ATHR39
AVAL40
AASP109
AGLN196

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GAI A 6801
ChainResidue
BTYR468
APHE70
AGLU157
APRO158
AVAL159
AHOH1261

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GAI A 6811
ChainResidue
AILE146
AASP147
APHE150
BPHE459
BHOH659

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 6901
ChainResidue
ATYR153
AARG155
BSER443
DPHE151

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 6921
ChainResidue
APHE18
ATYR101
ATYR203
AHOH1298

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE I3E A 8001
ChainResidue
APHE170
ALEU173
AGLU268
APHE296
ACYS301
ACYS302
AASP457
APHE459

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA B 601
ChainResidue
BTHR39
BVAL40
BASP109
BGLN196
BHOH2061

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GAI B 6801
ChainResidue
ATYR468
BGLU157
BPRO158
BVAL159

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GAI B 6811
ChainResidue
APHE459
BILE146
BASP147
BPHE150

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 6911
ChainResidue
BASN41
BTHR44
BLEU108

site_idBC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE I3E B 8001
ChainResidue
BPHE170
BGLU268
BPHE296
BCYS301
BCYS302
BCYS303
BASP457
BPHE459

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO C 6901
ChainResidue
ASER443
BTYR153
BARG155
CPHE151

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA C 601
ChainResidue
CTHR39
CVAL40
CASP109
CGLN196
CHOH783
CHOH1793

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GAI C 6801
ChainResidue
CGLU157
CPRO158
CVAL159
DTYR468

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GAI C 6811
ChainResidue
CILE146
CASP147
CPHE150
CHOH1214
DPHE459

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GAI C 6821
ChainResidue
CPHE350
CALA375
CASP376
CGLY378
CEDO6961

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO C 501
ChainResidue
BPHE151
CTYR153
CARG155
DASN440
DSER443

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO C 6911
ChainResidue
CASN41
CTHR44
CGLU46
CLEU108
CHOH1539

site_idCC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO C 6921
ChainResidue
CPHE18
CTYR203
CHOH589

site_idCC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO C 6961
ChainResidue
CGLU347
CGAI6821
FGLY45

site_idCC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE I3E C 8001
ChainResidue
CCYS302
CCYS303
CPHE459
CPHE170
CGLU268
CPHE296
CCYS301

site_idCC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GAI C 502
ChainResidue
CPHE459
CHOH1458
CHOH2049
DILE146
DASP147
DPHE150

site_idCC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA D 601
ChainResidue
DTHR39
DVAL40
DASP109
DGLN196

site_idCC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GAI D 6801
ChainResidue
CTYR468
DGLU157
DPRO158
DVAL159

site_idCC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO D 6901
ChainResidue
APHE151
CSER443
DTYR153
DARG155

site_idCC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE I3E D 8001
ChainResidue
DASN169
DPHE170
DGLU268
DPHE296
DCYS301
DCYS302
DPHE459
DPHE465

site_idCC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA E 601
ChainResidue
ETHR39
EVAL40
EASP109
EGLN196
EHOH2549

site_idDC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GAI E 6801
ChainResidue
EPHE70
EGLU157
EPRO158
EVAL159
EHOH1588
FTYR468

site_idDC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO E 6901
ChainResidue
ETYR153
EARG155
FSER443
HPHE151

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO E 6921
ChainResidue
EPHE18
ETYR101
ETYR203
EHOH2283

site_idDC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE I3E E 8001
ChainResidue
EPHE170
EGLU268
EPHE296
ECYS301
ECYS302
EPHE459

site_idDC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GAI E 6811
ChainResidue
EPHE459
FILE146
FASP147
FPHE150

site_idDC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GAI F 6811
ChainResidue
EASP147
EPHE150
FPHE459
FHOH1930

site_idDC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA F 601
ChainResidue
FTHR39
FVAL40
FASP109
FGLN196
FHOH591

site_idDC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GAI F 6801
ChainResidue
ETYR468
FGLU157
FPRO158
FVAL159
FHOH549
FHOH1128
FHOH2342

site_idDC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GAI F 6821
ChainResidue
FALA375
FASP376
FGLY378
FHOH2564
FEDO6961

site_idEC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO F 6901
ChainResidue
ESER443
FTYR153
FARG155
GPHE151

site_idEC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO F 6911
ChainResidue
FASN41
FTHR44
FGLU46
FLEU108
FHOH2374

site_idEC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO F 6921
ChainResidue
FPHE18
FTYR101
FTYR203
FHOH629
FHOH1304
FHOH2251

site_idEC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO F 6951
ChainResidue
BILE373
FALA68
FSER74
FHOH617
FHOH2184

site_idEC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO F 6961
ChainResidue
CGLY45
FGLU347
FGAI6821

site_idEC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE I3E F 8001
ChainResidue
FASN169
FPHE170
FGLU268
FPHE296
FCYS301
FCYS302
FPHE459

site_idEC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO F 501
ChainResidue
FPHE151
GTYR153
GARG155
HSER443

site_idEC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA G 601
ChainResidue
GTHR39
GVAL40
GASP109
GGLN196
GHOH528
GHOH1885

site_idEC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GAI G 6801
ChainResidue
GPHE70
GGLU157
GPRO158
GVAL159
GHOH1393
HTYR468

site_idFC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GAI G 6811
ChainResidue
GILE146
GASP147
GPHE150
HVAL458
HPHE459

site_idFC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO G 6921
ChainResidue
DALA7
GTYR101
GTYR203

site_idFC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE I3E G 8001
ChainResidue
GASN169
GPHE170
GGLU268
GPHE296
GCYS301
GCYS302
GCYS303
GPHE459

site_idFC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA H 601
ChainResidue
HTHR39
HVAL40
HASP109
HGLN196

site_idFC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GAI H 6801
ChainResidue
GTYR468
HPHE70
HGLU157
HPRO158
HVAL159
HHOH1616
HHOH1711

site_idFC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GAI H 6811
ChainResidue
GPHE459
GHOH504
HILE146
HASP147
HPHE150
HHOH1679

site_idFC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO H 6901
ChainResidue
EPHE151
GSER443
HTYR153
HARG155

site_idFC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO H 6911
ChainResidue
GLYS469
HASP239
HASN261
HLYS263
HARG264
HHOH1647
HHOH2299

site_idFC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO H 6921
ChainResidue
ELYS361
HPHE18
HTYR101
HTYR203

site_idGC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE I3E H 8001
ChainResidue
HMET124
HPHE170
HGLU268
HPHE296
HCYS301
HCYS302
HCYS303
HPHE459

Functional Information from PROSITE/UniProt
site_idPS00070
Number of Residues12
DetailsALDEHYDE_DEHYDR_CYS Aldehyde dehydrogenases cysteine active site. FfNQGQCCCAGS
ChainResidueDetails
APHE295-SER306

site_idPS00687
Number of Residues8
DetailsALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. LELGGKSP
ChainResidueDetails
ALEU267-PRO274

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AGLU268
BGLU268
CGLU268
DGLU268
EGLU268
FGLU268
GGLU268
HGLU268

site_idSWS_FT_FI2
Number of Residues8
DetailsACT_SITE: Nucleophile
ChainResidueDetails
ACYS302
BCYS302
CCYS302
DCYS302
ECYS302
FCYS302
GCYS302
HCYS302

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AGLY245
BGLY245
CGLY245
DGLY245
EGLY245
FGLY245
GGLY245
HGLY245

site_idSWS_FT_FI4
Number of Residues8
DetailsSITE: Transition state stabilizer => ECO:0000250|UniProtKB:P20000
ChainResidueDetails
AASN169
BASN169
CASN169
DASN169
EASN169
FASN169
GASN169
HASN169

site_idSWS_FT_FI5
Number of Residues72
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P47738
ChainResidueDetails
ALYS35
BLYS35
BLYS56
BLYS61
BLYS142
BLYS351
BLYS366
BLYS409
BLYS411
BLYS434
CLYS35
ALYS56
CLYS56
CLYS61
CLYS142
CLYS351
CLYS366
CLYS409
CLYS411
CLYS434
DLYS35
DLYS56
ALYS61
DLYS61
DLYS142
DLYS351
DLYS366
DLYS409
DLYS411
DLYS434
ELYS35
ELYS56
ELYS61
ALYS142
ELYS142
ELYS351
ELYS366
ELYS409
ELYS411
ELYS434
FLYS35
FLYS56
FLYS61
FLYS142
ALYS351
FLYS351
FLYS366
FLYS409
FLYS411
FLYS434
GLYS35
GLYS56
GLYS61
GLYS142
GLYS351
ALYS366
GLYS366
GLYS409
GLYS411
GLYS434
HLYS35
HLYS56
HLYS61
HLYS142
HLYS351
HLYS366
ALYS409
HLYS409
HLYS411
HLYS434
ALYS411
ALYS434

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 803
ChainResidueDetails
ALYS192electrostatic stabiliser
AGLU268electrostatic stabiliser, proton acceptor, proton donor
ACYS302covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
AGLU399electrostatic stabiliser

site_idMCSA2
Number of Residues4
DetailsM-CSA 803
ChainResidueDetails
BLYS192electrostatic stabiliser
BGLU268electrostatic stabiliser, proton acceptor, proton donor
BCYS302covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
BGLU399electrostatic stabiliser

site_idMCSA3
Number of Residues4
DetailsM-CSA 803
ChainResidueDetails
CLYS192electrostatic stabiliser
CGLU268electrostatic stabiliser, proton acceptor, proton donor
CCYS302covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
CGLU399electrostatic stabiliser

site_idMCSA4
Number of Residues4
DetailsM-CSA 803
ChainResidueDetails
DLYS192electrostatic stabiliser
DGLU268electrostatic stabiliser, proton acceptor, proton donor
DCYS302covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
DGLU399electrostatic stabiliser

site_idMCSA5
Number of Residues4
DetailsM-CSA 803
ChainResidueDetails
ELYS192electrostatic stabiliser
EGLU268electrostatic stabiliser, proton acceptor, proton donor
ECYS302covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
EGLU399electrostatic stabiliser

site_idMCSA6
Number of Residues4
DetailsM-CSA 803
ChainResidueDetails
FLYS192electrostatic stabiliser
FGLU268electrostatic stabiliser, proton acceptor, proton donor
FCYS302covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
FGLU399electrostatic stabiliser

site_idMCSA7
Number of Residues4
DetailsM-CSA 803
ChainResidueDetails
GLYS192electrostatic stabiliser
GGLU268electrostatic stabiliser, proton acceptor, proton donor
GCYS302covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
GGLU399electrostatic stabiliser

site_idMCSA8
Number of Residues4
DetailsM-CSA 803
ChainResidueDetails
HLYS192electrostatic stabiliser
HGLU268electrostatic stabiliser, proton acceptor, proton donor
HCYS302covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
HGLU399electrostatic stabiliser

226707

PDB entries from 2024-10-30

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