Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004527 | molecular_function | exonuclease activity |
A | 0006259 | biological_process | DNA metabolic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0051908 | molecular_function | double-stranded DNA 5'-3' DNA exonuclease activity |
B | 0004527 | molecular_function | exonuclease activity |
B | 0006259 | biological_process | DNA metabolic process |
B | 0046872 | molecular_function | metal ion binding |
B | 0051908 | molecular_function | double-stranded DNA 5'-3' DNA exonuclease activity |
C | 0004527 | molecular_function | exonuclease activity |
C | 0006259 | biological_process | DNA metabolic process |
C | 0046872 | molecular_function | metal ion binding |
C | 0051908 | molecular_function | double-stranded DNA 5'-3' DNA exonuclease activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PO4 A 227 |
Chain | Residue |
A | VAL17 |
A | TRP24 |
A | LEU27 |
A | ARG28 |
A | PRO104 |
A | ILE105 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL A 228 |
Chain | Residue |
A | CL229 |
A | HOH299 |
A | ALA34 |
A | SER35 |
A | SER117 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CL A 229 |
Chain | Residue |
A | THR33 |
A | CYS116 |
A | SER117 |
A | CL228 |
A | HOH394 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG B 227 |
Chain | Residue |
B | ASP119 |
B | GLU129 |
B | LEU130 |
B | HOH550 |
E | DG2 |
E | HOH543 |
site_id | AC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE PO4 C 227 |
Chain | Residue |
C | ARG28 |
C | THR33 |
C | ALA34 |
C | SER35 |
C | ALA115 |
C | CYS116 |
C | SER117 |
C | HOH527 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG E 15 |
Chain | Residue |
B | ASP119 |
B | HOH277 |
B | HOH305 |
B | HOH310 |
E | DA1 |
E | DG2 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | BINDING: |
Chain | Residue | Details |
A | ASP119 | |
A | GLU129 | |
B | ASP119 | |
B | GLU129 | |
C | ASP119 | |
C | GLU129 | |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 6 |
Details | M-CSA 836 |
Chain | Residue | Details |
A | GLU93 | metal ligand |
A | GLU102 | electrostatic stabiliser |
A | ASP109 | metal ligand |
A | GLU129 | increase nucleophilicity, metal ligand, proton acceptor, proton donor |
A | LEU130 | metal ligand |
A | ALA131 | electrostatic stabiliser, proton acceptor, proton donor, proton relay |
site_id | MCSA2 |
Number of Residues | 6 |
Details | M-CSA 836 |
Chain | Residue | Details |
B | GLU93 | metal ligand |
B | GLU102 | electrostatic stabiliser |
B | ASP109 | metal ligand |
B | GLU129 | increase nucleophilicity, metal ligand, proton acceptor, proton donor |
B | LEU130 | metal ligand |
B | ALA131 | electrostatic stabiliser, proton acceptor, proton donor, proton relay |
site_id | MCSA3 |
Number of Residues | 6 |
Details | M-CSA 836 |
Chain | Residue | Details |
C | GLU93 | metal ligand |
C | GLU102 | electrostatic stabiliser |
C | ASP109 | metal ligand |
C | GLU129 | increase nucleophilicity, metal ligand, proton acceptor, proton donor |
C | LEU130 | metal ligand |
C | ALA131 | electrostatic stabiliser, proton acceptor, proton donor, proton relay |