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3S3M

Crystal structure of the Prototype Foamy Virus (PFV) intasome in complex with magnesium and Dolutegravir (S/GSK1349572)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0015074biological_processDNA integration
B0003676molecular_functionnucleic acid binding
B0015074biological_processDNA integration
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 393
ChainResidue
AHIS62
AHIS66
ACYS96
ACYS99

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 394
ChainResidue
AHIS338
ALYS339
AHIS357
AHOH428

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 801
ChainResidue
ATHR163
ASER164
AHOH440
ASER162

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 802
ChainResidue
APRO135
ASER136
AGLN137
ALYS241
AHOH544

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 803
ChainResidue
ALEU292
AGLN296
BASP273

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 805
ChainResidue
AGLN60
ALEU79
ATYR80
APRO277
APHE278

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE NH4 A 395
ChainResidue
AASP116

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 396
ChainResidue
AASP128
AASP185
ADLU398
AHOH400
AHOH526

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 397
ChainResidue
AASP128
AGLU221
AASN224
ADLU398
DHOH18

site_idBC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE DLU A 398
ChainResidue
AASP128
AASP185
ATYR212
APRO214
AGLN215
AGLU221
AARG329
AMG396
AMG397
AHOH400
AHOH526
CDG4
DDC16
DDA17
DHOH18

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 393
ChainResidue
BLYS219
BARG222
BSER258
BPRO259
BVAL260

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HEZ B 394
ChainResidue
BLEU155
BTYR156
BTYR243
BGLN250

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP123
AASP185
BASP123
BASP185

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PDB entries from 2024-07-17

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