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3RO0

Crystal structure of Bacillus amyloliquefaciens pyroglutamyl peptidase I and terpyridine platinum(II)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
A0016920molecular_functionpyroglutamyl-peptidase activity
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006508biological_processproteolysis
B0008234molecular_functioncysteine-type peptidase activity
B0016920molecular_functionpyroglutamyl-peptidase activity
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0006508biological_processproteolysis
C0008234molecular_functioncysteine-type peptidase activity
C0016920molecular_functionpyroglutamyl-peptidase activity
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0006508biological_processproteolysis
D0008234molecular_functioncysteine-type peptidase activity
D0016920molecular_functionpyroglutamyl-peptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE TPT A 480
ChainResidue
APHE10
AHOH284
AHOH910
APHE13
AASN19
ATHR45
AGLN71
AALA139
ACYS144
AHIS168
AHOH245

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE TPT B 481
ChainResidue
BPHE10
BPHE13
BTHR45
BGLN71
BALA139
BCYS144
BHIS168
BHOH337
BHOH923

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE TPT C 482
ChainResidue
CPHE10
CPHE13
CTHR45
CGLN71
CALA139
CCYS144
CHIS168
CHOH730

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE TPT D 483
ChainResidue
DPHE10
DPHE13
DTHR45
DGLN71
DALA139
DPHE142
DCYS144
DHIS168
DHOH454
DHOH728

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE TPT D 484
ChainResidue
DHIS158
DHIS159
DPRO160
DHIS161
DHOH507
DHOH688

Functional Information from PROSITE/UniProt
site_idPS01333
Number of Residues17
DetailsPYRASE_GLU Pyrrolidone-carboxylate peptidase glutamic acid active site. GqaGgrmqITpERVAiN
ChainResidueDetails
AGLY70-ASN86

site_idPS01334
Number of Residues15
DetailsPYRASE_CYS Pyrrolidone-carboxylate peptidase cysteine active site. IpAaVSyTAGtFVCN
ChainResidueDetails
AILE131-ASN145

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsACT_SITE:
ChainResidueDetails
AGLU81
ACYS144
AHIS168
BGLU81
BCYS144
BHIS168
CGLU81
CCYS144
CHIS168
DGLU81
DCYS144
DHIS168

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 633
ChainResidueDetails
AGLU81electrostatic stabiliser
AARG91electrostatic stabiliser
AHIS168proton acceptor, proton donor
ACYS144electrostatic stabiliser

site_idMCSA2
Number of Residues4
DetailsM-CSA 633
ChainResidueDetails
BCYS144electrostatic stabiliser
BGLU81electrostatic stabiliser
BARG91electrostatic stabiliser
BHIS168proton acceptor, proton donor

site_idMCSA3
Number of Residues4
DetailsM-CSA 633
ChainResidueDetails
CGLU81electrostatic stabiliser
CARG91electrostatic stabiliser
CHIS168proton acceptor, proton donor
CCYS144electrostatic stabiliser

site_idMCSA4
Number of Residues4
DetailsM-CSA 633
ChainResidueDetails
DGLU81electrostatic stabiliser
DARG91electrostatic stabiliser
DHIS168proton acceptor, proton donor
DCYS144electrostatic stabiliser

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PDB entries from 2024-06-12

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