Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3RII

Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme

Functional Information from GO Data
ChainGOidnamespacecontents
A0004843molecular_functioncysteine-type deubiquitinase activity
A0006511biological_processubiquitin-dependent protein catabolic process
A0016579biological_processprotein deubiquitination
A0031011cellular_componentIno80 complex
A0070628molecular_functionproteasome binding
B0004843molecular_functioncysteine-type deubiquitinase activity
B0006511biological_processubiquitin-dependent protein catabolic process
B0016579biological_processprotein deubiquitination
B0031011cellular_componentIno80 complex
B0070628molecular_functionproteasome binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 229
ChainResidue
APHE56
ALYS57
ATRP58
AGLN59
AGLU62
ATYR211
AHOH288

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 230
ChainResidue
AHOH349
BHOH351
AGLU109
AGLU113

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 229
ChainResidue
BALA80
BGLN91
BALA92
BSER95
BGLY180
BHOH335

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PROSITE-ProRule","id":"PRU01393","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PROSITE-ProRule","id":"PRU01393","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsSite: {"description":"Transition state stabilizer","evidences":[{"source":"PROSITE-ProRule","id":"PRU01393","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsSite: {"description":"Important for enzyme activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01393","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q9WUP7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

250835

PDB entries from 2026-03-18

PDB statisticsPDBj update infoContact PDBjnumon